ZFIN is now using GRCz12tu for Genomic Data
Gene
ptp4a2b
- ID
- ZDB-GENE-041114-111
- Name
- protein tyrosine phosphatase 4A2b
- Symbol
- ptp4a2b Nomenclature History
- Previous Names
-
- PRL-2 (1)
- ptp4a2
- fc05f09
- wu:fc05f09
- wu:fi84b06
- zgc:101724
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable protein tyrosine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including fin; gut; head; myotome; and neuromast. Orthologous to human PTP4A2 (protein tyrosine phosphatase 4A2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000387 | Tyrosine-specific protein phosphatases domain |
| Domain | IPR003595 | Protein-tyrosine phosphatase, catalytic |
| Domain | IPR020422 | Dual specificity protein phosphatase domain |
| Family | IPR050561 | Protein Tyrosine Phosphatase |
| Homologous_superfamily | IPR029021 | Protein-tyrosine phosphatase-like |
Domain Details Per Protein
| Protein | Additional Resources | Length | Dual specificity protein phosphatase domain | Protein Tyrosine Phosphatase | Protein-tyrosine phosphatase, catalytic | Protein-tyrosine phosphatase-like | Tyrosine-specific protein phosphatases domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q6TLG9 | InterPro | 168 | |||||
| UniProtKB:Q5U3R3 | InterPro | 174 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ptp4a2b-201
(1)
|
Ensembl | 2,222 nt | ||
| mRNA |
ptp4a2b-203
(1)
|
Ensembl | 816 nt | ||
| mRNA |
ptp4a2b-204
(1)
|
Ensembl | 5,641 nt | ||
| ncRNA |
ptp4a2b-003
(1)
|
Ensembl | 497 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers