Gene

rcl1

ID
ZDB-GENE-040930-11
Name
RNA terminal phosphate cyclase-like 1
Symbol
rcl1 Nomenclature History
Previous Names
  • zgc:109921
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have endoribonuclease activity. Predicted to be involved in endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Localizes to nucleolus. Is expressed in several structures, including alar plate midbrain region; head; liver; optic tectum; and optic vesicle. Orthologous to human RCL1 (RNA terminal phosphate cyclase like 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rcl1 Human Ortholog
No data available
Associated With rcl1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site
Domain IPR013791 RNA 3'-terminal phosphate cyclase, insert domain
Domain IPR023797 RNA 3'-terminal phosphate cyclase domain
Family IPR000228 RNA 3'-terminal phosphate cyclase
Family IPR016443 RNA 3'-terminal phosphate cyclase type 2
Homologous_superfamily IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
Homologous_superfamily IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily
Homologous_superfamily IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily
Domain Details Per Protein
Protein Length RNA 3'-terminal phosphate cyclase RNA 3'-terminal phosphate cyclase domain RNA 3'-terminal phosphate cyclase domain superfamily RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RNA 3'-terminal phosphate cyclase, insert domain RNA 3'-terminal phosphate cyclase, insert domain superfamily RNA 3'-terminal phosphate cyclase-like, conserved site RNA 3'-terminal phosphate cyclase type 2
UniProtKB:F1RAI8 367
UniProtKB:Q504F0 367
UniProtKB:Q6DRI3 367
Transcripts
Genome Browsers
No data available
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations