Gene

pdcd6ip

ID
ZDB-GENE-040426-2678
Name
programmed cell death 6 interacting protein
Symbol
pdcd6ip Nomenclature History
Previous Names
  • wu:fb70d03 (1)
  • wu:fy65h02 (1)
  • zgc:63638
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Is expressed in cloaca; epidermis; otic vesicle; and sensory system. Orthologous to human PDCD6IP (programmed cell death 6 interacting protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Corbett et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pdcd6ip Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Microcephaly 29, primary, autosomal recessive 620047
Associated With pdcd6ip Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004328 BRO1 domain
Domain IPR025304 ALIX V-shaped domain
Homologous_superfamily IPR038499 BRO1 domain superfamily
Domain Details Per Protein
Protein Length ALIX V-shaped domain BRO1 domain BRO1 domain superfamily
UniProtKB:B8JLR1 866
UniProtKB:A0A8M2B6D5 871
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA pdcd6ip-201 (1) Havana 4172 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-PDCD6IP monoclonal Rabbit
  • IHC
  • WB
Cell Signaling Technology, Inc.
BioLegend
1
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations