ZFIN is now using GRCz12tu for Genomic Data
Gene
pyroxd1
- ID
- ZDB-GENE-040426-1732
- Name
- pyridine nucleotide-disulphide oxidoreductase domain 1
- Symbol
- pyroxd1 Nomenclature History
- Previous Names
-
- ryroxd1 (1)
- zgc:73254
- Type
- protein_coding_gene
- Location
- Chr: 4 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable flavin adenine dinucleotide binding activity and oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor. Predicted to be located in nucleus and sarcomere. Is expressed in female organism and trunk musculature. Human ortholog(s) of this gene implicated in myofibrillar myopathy 8. Orthologous to human PYROXD1 (pyridine nucleotide-disulphide oxidoreductase domain 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:73254 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from O'Grady et al., 2016
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| myofibrillar myopathy 8 | Alliance | Myopathy, myofibrillar, 8 | 617258 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR023753 | FAD/NAD(P)-binding domain |
| Domain | IPR041575 | NADH-rubredoxin oxidoreductase, C-terminal |
| Family | IPR050260 | FAD-dependent oxidoreductase |
| Homologous_superfamily | IPR016156 | FAD/NAD-linked reductase, dimerisation domain superfamily |
| Homologous_superfamily | IPR036188 | FAD/NAD(P)-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | FAD-dependent oxidoreductase | FAD/NAD-linked reductase, dimerisation domain superfamily | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain superfamily | NADH-rubredoxin oxidoreductase, C-terminal |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q6PBT5 | InterPro | 490 | |||||
| UniProtKB:A0A0R4IEM7 | InterPro | 485 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pyroxd1-201
(1)
|
Ensembl | 4,462 nt | ||
| mRNA |
pyroxd1-202
(1)
|
Ensembl | 2,226 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-ryroxd1 |
|
Abmart
|
2 |
Plasmids
No data available
- Genome Browsers