ZFIN is now using GRCz12tu for Genomic Data
Gene
atp6v1aa
- ID
- ZDB-GENE-040426-1143
- Name
- ATPase H+ transporting V1 subunit Aa
- Symbol
- atp6v1aa Nomenclature History
- Previous Names
-
- atp6v1al
- HA (1)
- zgc:63516
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables proton transmembrane transporter activity. Acts upstream of or within apical protein localization; intracellular monoatomic cation homeostasis; and proton transmembrane transport. Predicted to be located in apical plasma membrane. Predicted to be part of proton-transporting V-type ATPase, V1 domain. Is expressed in several structures, including extension; hatching gland; integument; ionocyte progenitor cell; and sensory system. Human ortholog(s) of this gene implicated in autosomal recessive cutis laxa type IID and developmental and epileptic encephalopathy 93. Orthologous to human ATP6V1A (ATPase H+ transporting V1 subunit A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 36 figures from 19 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:63516 (14 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| autosomal recessive cutis laxa type IID | Alliance | Cutis laxa, autosomal recessive, type IID | 617403 |
| developmental and epileptic encephalopathy 93 | Alliance | Developmental and epileptic encephalopathy 93 | 618012 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Active_site | IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site |
| Domain | IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
| Domain | IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain |
| Domain | IPR031686 | ATPsynthase alpha/beta subunit, barrel-sandwich domain |
| Domain | IPR055190 | ATP synthase A/B type, C-terminal domain |
| Family | IPR005725 | ATPase, V1 complex, subunit A |
| Family | IPR022878 | V-type ATP synthase catalytic alpha chain |
| Homologous_superfamily | IPR023366 | ATP synthase subunit alpha, N-terminal domain-like superfamily |
| Homologous_superfamily | IPR024034 | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal | ATPase, V1 complex, subunit A | ATP synthase A/B type, C-terminal domain | ATPsynthase alpha/beta subunit, barrel-sandwich domain | ATP synthase subunit alpha, N-terminal domain-like superfamily | P-loop containing nucleoside triphosphate hydrolase | V-type ATP synthase catalytic alpha chain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q7SY46 | InterPro | 617 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
atp6v1aa-201
(1)
|
Ensembl | 2,609 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab5-atp6v1a | polyclonal | Rabbit |
|
1 |
Plasmids
No data available
- Genome Browsers