Gene

cyc1

ID
ZDB-GENE-031105-2
Name
cytochrome c-1
Symbol
cyc1 Nomenclature History
Previous Names
  • fb80h03
  • im:6911272
  • sr:nyz104
  • wu:fb80h03
  • zgc:123089
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to enable heme binding activity; metal ion binding activity; and ubiquinol-cytochrome-c reductase activity. Predicted to be involved in mitochondrial electron transport, ubiquinol to cytochrome c. Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex III. Is expressed in several structures, including adaxial cell; digestive system; eye; midbrain; and musculature system. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 6. Orthologous to human CYC1 (cytochrome c1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
10 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With cyc1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
mitochondrial complex III deficiency nuclear type 6 Alliance Mitochondrial complex III deficiency, nuclear type 6 615453
1 - 1 of 1
Associated With cyc1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR009056 Cytochrome c-like domain
Family IPR002326 Cytochrome c1
Homologous_superfamily IPR021157 Cytochrome c1, transmembrane anchor, C-terminal
Homologous_superfamily IPR036909 Cytochrome c-like domain superfamily
1 - 4 of 4
Domain Details Per Protein
Protein Additional Resources Length Cytochrome c1 Cytochrome c1, transmembrane anchor, C-terminal Cytochrome c-like domain Cytochrome c-like domain superfamily
UniProtKB:Q3B7R0 InterPro 307
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 6
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cyc1-201 (1) Ensembl 1,591 nt
mRNA cyc1-203 (1) Ensembl 486 nt
ncRNA cyc1-003 (1) Ensembl 772 nt
ncRNA cyc1-004 (1) Ensembl 852 nt
ncRNA cyc1-005 (1) Ensembl 775 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-231H5ZFIN Curated Data
EncodesESTfb80h03
EncodesESTfz41g09ZFIN Curated Data
EncodesESTIMAGE:6911272
EncodesESTnyz104ZFIN Curated Data
EncodescDNAMGC:123089ZFIN Curated Data
EncodescDNAMGC:162442ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanCYC18
Amino acid sequence comparison (1)
Citations
1 - 10 of 20
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