Genomic Feature
ta98
- ID
- ZDB-ALT-980203-1630
- Name
- ta98
- Synonyms
-
- A98A (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- Nüsslein-Volhard Lab
- Current Source
-
Zebrafish International Resource Center (ZIRC)
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European Zebrafish Resource Center (EZRC) ( order this ) - Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 4: 8662547 (GRCz11) (1) Details
- Nucleotide change
- T/C
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- T>C at position 968 (1)
- Transcript Consequence
- Missense (1)
- Protein Consequence
- Amino Acid Substitution: Cys>Arg at position 323 (1)
- Flanking Sequence
-
GCTTGCTTTTTACAACTACACCATCAGTATATTTCACCAGTCATATAAAAACTCACTCTGGACAATGAAAGTTTTAGTGCATGTTTGGAATCCCTGTTATGTGTGTATTCTTTGGTTCACTGCTCATTGAAATAACTACCCTCAATCTCTCTCCCTCTCTCTTAAAGGCGGTGTATAATCTAGCGAATGTGGCCTGCAAGTGTCATGGCGTCTCAGGCTCGTGCAGCTTGAAAACCTGCTGGCTCCAGCTGGCCGACTTCCGGCGTGTTGGAGAATTCCTGAAGGAGAAATACGACAGCGCCGCCGCCATGCGCATTAACCGACGTGGAAAACTAGAGCTGGTCAATAATCGATTCAACCCACCGACAGGTGAAGATCTGGTCTACATCGACCCCAGCCCGGATTACTGCCTGCGCAATGAAACCACTGGGTCTCTGGGCACCCAAGGCCGCCTATGCAACAAGACCTCGGAGGGTATGGACGGCTGCGAGCTCATGTGC
T/C GCGGCCGCGGGTACGACCAGTTCAAGACCTACAAACATGAGCGCTGCCACTGCAAGTTCCACTGGTGCTGCTATGTCAAGTGCAAACGCTGCACGTCACTCGTAGACCAGTTTGTGTGCAAGTAGCAGACGTGAGAACTGGGGGACAGACGCACTGAGCAATTAAGCAGGAGAAGAAACGGGACCCTTAACGGACCCAGAGGGGCAACTTAGAGATAATTAAATGTAAAAATGATATATTAAATAGCAACAAATTAAAATAAGTATATAAATAAGTGTACGTGTGCCGTTGATAGTAATTTAATGACCTGAGGATCCACGTTGGACGTCATTGATGAAAAAGGAGGCACCGGTGTGATGCATTCCGGCTCAAGCTGTGTTTCTCTCATAAAGAGAGGAAGGAACTCTTGACTTGTGCTACAAGAAACTCTTTAGAGACTCGAGGAAAAGGCGCAGAAATAGGATGGGGAACATCAAGGGCGCATCACCCACCCATTGCCT - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
wnt5bta98/ta98 | Homozygous | ♀-/- ♂-/- | 4 figures from Kilian et al., 2003 | 3 figures from Kilian et al., 2003 | |
wnt5bta98/ta98 | Homozygous | ♀+/- ♂+/- | 15 figures ![]() | 7 figures ![]() | |
wnt5bta98/ta98 | Homozygous | Unknown | Fig. 5 from Ren et al., 2019 | ||
wnt5bta98/+ | Heterozygous | Unknown | Fig. 1 from Gerdes et al., 2007 | ||
wnt5bta98/+ | Heterozygous | ♀+/- ♂+/- | Fig. 4 ![]() | ||
wnt5bta98/ta98; ia5Tg; twu277Tg | Complex | Fig. 5 from Ren et al., 2019 | |||
wnt5bta98/ta98; twu277Tg | Complex | Fig. 5 from Ren et al., 2019 | |||
wnt5bta98/ta98; y1Tg | Complex | Fig. 3 ![]() | |||
wnt5bta98/+ + MO1-bbs1 | Complex | Fig. 1 from Gerdes et al., 2007 | Fig. 1 from Gerdes et al., 2007 | ||
wnt5bta98/+ + MO1-bbs4 | Complex | Fig. 1 from Gerdes et al., 2007 | Fig. 1 from Gerdes et al., 2007 |
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Supplemental Information
- Genotyping protocol
- None
- Dranow, D.B., Le Pabic, P., Schilling, T.F. (2023) The non-canonical Wnt receptor Ror2 is required for cartilage cell polarity and morphogenesis of the craniofacial skeleton in zebrafish. Development (Cambridge, England). 150(8):
- Schauer, A., Pinheiro, D., Hauschild, R., Heisenberg, C.P. (2020) Zebrafish embryonic explants undergo genetically encoded self-assembly. eLIFE. 9:
- Ren, J., Han, P., Ma, X., Farah, E.N., Bloomekatz, J., Zeng, X.I., Zhang, R., Swim, M.M., Witty, A.D., Knight, H.G., Deshpande, R., Xu, W., Yelon, D., Chen, S., Chi, N.C. (2019) Canonical Wnt5b Signaling Directs Outlying Nkx2.5+ Mesoderm into Pacemaker Cardiomyocytes. Developmental Cell. 50(6):729-743.e5
- Merks, A.M., Swinarski, M., Meyer, A.M., Müller, N.V., Özcan, I., Donat, S., Burger, A., Gilbert, S., Mosimann, C., Abdelilah-Seyfried, S., Panáková, D. (2018) Planar cell polarity signalling coordinates heart tube remodelling through tissue-scale polarisation of actomyosin activity. Nature communications. 9:2161
- Santos-Ledo, A., Garcia-Macia, M., Campbell, P.D., Gronska, M., Marlow, F.L. (2017) Kinesin-1 promotes chondrocyte maintenance during skeletal morphogenesis. PLoS Genetics. 13:e1006918
- Sisson, B.E., Dale, R.M., Mui, S.R., Topczewska, J.M., Topczewski, J. (2015) A role of glypican4 and wnt5b in chondrocyte stacking underlying craniofacial cartilage morphogenesis. Mechanisms of Development. 138 Pt 3:279-90
- Oteiza, P., Köppen, M., Krieg, M., Pulgar, E., Farias, C., Melo, C., Preibisch, S., Müller, D., Tada, M., Hartel, S., Heisenberg, C.P., and Concha, M.L. (2010) Planar cell polarity signalling regulates cell adhesion properties in progenitors of the zebrafish laterality organ. Development (Cambridge, England). 137(20):3459-3468
- Sisson, B.E., and Topczewski, J. (2009) Expression of five frizzleds during zebrafish craniofacial development. Gene expression patterns : GEP. 9(7):520-527
- Gerdes, J.M., Liu, Y., Zaghloul, N.A., Leitch, C.C., Lawson, S.S., Kato, M., Beachy, P.A., Beales, P.L., Demartino, G.N., Fisher, S., Badano, J.L., and Katsanis, N. (2007) Disruption of the basal body compromises proteasomal function and perturbs intracellular Wnt response. Nature Genetics. 39(11):1350-1360
- Stoick-Cooper, C.L., Weidinger, G., Riehle, K.J., Hubbert, C., Major, M.B., Fausto N., and Moon, R.T. (2007) Distinct Wnt signaling pathways have opposing roles in appendage regeneration. Development (Cambridge, England). 134(3):479-489
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