Genomic Feature

zf3924

ID
ZDB-ALT-240926-3
Name
zf3924
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Delins
Variant Location
Chr 11: 25473187 - 25473188 (GRCz11) (1) Details
Nucleotide change
T/AAAAA
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp inserted / 1 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAGACCATTTGGGAGGAGCAAAATGATATCTTTTGGATCTCTATATAAGAGGGATTGCATGCCAATAATTTGAGGGAGTCTTCATCTGGTGACCAGTGAAGAGAGATTTGACATCAATCAAGGAATGCTGCAGTAATCTGCAGAAGAAATCAAACCATTTATTACAGCATTTCTCAGTGGAGTGGGCACCAATTACAAGCAAGATGAAGCAACAACAGCAAACGCCAGAACTGTTCGAAGACTTCCACATGCCCATCACTTTAGACGTCAGCAACATCTCAGCTTACAGCCCTTTCCTGGTCCCACAGGACCACCTGGGACACAGTGGCGTATTCATGGGCATGTCCGCTTTTATGCTCTTCCTTTTTATCGCAGGAACTGCCATCAACGTTCTTACCATAGTTTGCACAATTCAATACAAGAAACTCAGATCTCACCTGAACTATATTCTTGTGAACCTTGCCATTTCCAACTTGTGGGTGTCCGTTTTCGGTTCCTCG
T/AAAAA AGCGTTCTACGCCTTTTACAAAAAGTACTTTGTCTTTGGGCCGATAGGATGCAAAATCGAGGGCTTCACTTCAACAATTGGAGGTACATTGTAACATGCGTCCACATTGTTTTAATGCTAGCCACATGTAGATCTTACATTCTGCTACTGGACTGTGATGGTTTCAACAATCTTCTTTCTGTGTTTTTGCAGGAATGGTGAGTTTGTGGTCTCTTGCTGTGGTGGCGCTGGAAAGGTGGCTGGTCATTTGCAAACCCCTCGGGAACTTTACCTTCAAGACCCCTCATGCCATTGCCGGCTGCATACTTCCTTGGTGTATGGCATTGGCTGCTGGACTCCCTCCACTCTTAGGCTGGAGCCGGTAAGTCCCTTGGTTACATTTTACTTTGATGGTCCCTTCAGGCCTTCTGTTGACTTTGCAACTAGTATTACACAGCAAGTGTCCATGTGACCGTGTTCCTCATAGTCACTAAAATGTCTGTTGGCAGACGATCAGAATC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
opn1sw2zf3924/zf3924 (AB)Homozygous♀-/- ♂-/-2 figures from Wang et al., 20232 figures from Wang et al., 2023
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Supplemental Information
Genotyping protocol
None
Citations