Genomic Feature
zf3681
- ID
- ZDB-ALT-240110-11
- Name
- zf3681
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Kikuchi Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 20: 47027309 - 47027313 (GRCz11) (1) Details
- Nucleotide change
- GACGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GCATCTATTTCCAACACAACTGCACAAGCCAAACACAGCAAGGTCATTATTGAGCACACTACAGCTTCACACAGTGATCACCGGCAATGCAAACTGTTGCACATACTGTGGTTTAATACTATAGAGCATGTAATATACACTGCACAGTCTGCACTCCAGGAAGCTTGCATGTCTCTACACTTCTGGTTTAAAGCAACACACACACACATTTATGCAAAAGCAACACACACACTTATGCAAAAGCAACACACACACACACACACTTATGCAAAAGCCAAGTCAGCATTTTCTACTTTTATCCTCTGTGCTAAACAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGTAAGTAACACACACACACACATACCCACACATGCCGCTGTGTCTGCTGATCG
GACGG/- CCTCTTAGGTCGCTGTGTGTGTGTGGGTGGGTGCATGTGTGTAAAAAGACACTTTCAAAACTCAGAAAGAGCCAGACACACATGCACAGTTTCTTTGTTAGGGCATCACATGACTCGATGCTGATTGGTCACAGAGGGTTTGTTAAAAAAAGGAAAAGGGAGGGGGGAAAAAAAAGGGCAGGAAGACGTACAGCTCTGAACTTCAAAGAAAGCAAAAGCACAGACCAGAGAAAACAGAGAGAGATGGCTTAGATTTGCTGATGATTGACTCCTTTATTCATACTGAAGGATTTTACTAGACATTCTGAATGTCGATGTTACTAAAAAACGTCATTTTTATCTTGCTTTACACTTTTAAGACTTATTTATTAGGTGTTTGACAACTCATGAAGTCTTTTGGTGTTGTTATCACATGCTGGTGTAAGAATTTAGTCTAATTCCTCACACACAGACACTGAAAGCACTATTTTTGTAACAAAGATACCATTAAAGTGATGTCT - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
dnmt3aazf3681/zf3681 | Homozygous | ♀-/- ♂-/- | Fig. 1 ![]() |
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Supplemental Information
- Genotyping protocol
- None
- Shirai, M., Shimoda, N., Takahashi, H., Takayama, K., Kikuchi, Y. (2023) Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa-/- zebrafish during early developmental stages. Data in brief. 47:108967108967
- Shirai, M., Takayama, K., Takahashi, H., Hirose, Y., Fujii, M., Awazu, A., Shimoda, N., Kikuchi, Y. (2022) Methylome data derived from maternal-zygotic DNA methyltransferase 3aa-/- zebrafish. Data in brief. 44:108514
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