Genomic Feature

oz17

ID
ZDB-ALT-201207-20
Name
oz17
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Amacher Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 65949158 - 65949167 (GRCz11) (1) Details
Nucleotide change
CCCATCGGGA/-
Variant Notes
Predicted to frameshift mym kafter amino acid 170, before the last two  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GTCATTGTATAACAGTGGTTTGTTTTGTACACAATTGAAAACAAATATTGCTTAAGGGGGCTAACATTACATTAAAACATTAAACATTAAAATGATTTCTAAAAAATTAAAAACGTCTTTTATTCTAGCCAAAATAAAACAAATACATTTTTTTCCAGAAGAAAAAATATTATAGGAAATACTGTGAAAAGTTCCTTGCTCCATCATTTGGGAAATATTCGAAAAAAGAAAAACAAATTCACAGGAGGGCGAATAATTCTGTAAATCTATTTATGATAAAATAGACGTGTCAAACAGTGTGATGCAAAAGGCTATTTTTCACGAGCATGTTGACAGGTGTTTACATTTTGCATTCCACTTTGACGTGTCAAGTATTTGCTTTATTTGCAGCGCTTGGGGATTTCGATGAGCCCAAACGCTCTTCGCTCACCATGTTTGGGGTGTTGACCGCAGCTGTGAGGATCTACCAGGACCGACTGGGATACGGCATCTACTCCGGC
CCCATCGGGA/- CAGCTGTCTTTATGATCACAGTCAAATGGGTGAGTTTGAGACACGTCAGATGGGTCAGATTCTTCCAGTTAAGGTAGAGTTGTCCTGGAGGGCCAGTGTCCTGCAAAGTTTAGTTTCAATCCCAATCAGACACACCTGGGCTAGCTAATCAAGCTCTTACTAGGCTTTCTAGAAACATCCTTGCAGGTGAGTTGAGGCAAGTTGGAGCTAAAATCTGCAGGACACACCGGCCCTCCACGACCGAGTTTGGACACCCCATGAGTTAAGGAATTAGTTCATGTGAATGACGATATCTGTGAGATGGTCAAAGTTGTCCACATTAGTTTACACAGAATTTTATTTTATTTATTTATTTTTTTGTTAATAAAAAAATAACAGATTGTATGTACATTATATAACAGCAGTACATTGTAAAAAGTAAGAAGACTTTCGTAAAAAAGTGAGCAAATCCATTGGTTTTAAATCTATCAGTTGCCTTTACTTTAAAAAGTGAGCAAATC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
mymkoz17/oz17Homozygous♀+/- ♂+/-2 figures with image from Hromowyk et al., 2020Fig. 2 with image from Hromowyk et al., 2020
mymkoz17/oz17; fb121Tg; fb122Tg; i104TgComplex4 figures with image from Hromowyk et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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