Genomic Feature

bns50

ID
ZDB-ALT-170119-2
Name
bns50
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Stainier Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 20
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 25341595 - 25341601 (GRCz11) (1) Details
Nucleotide change
TTGTAAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TATCTTATTTGAGTGCATGTGGAGATATAGAATGGTATTAACTAGCATGATCAAGCTAGGCTTAAAATGGAGCTCTTTAGCAAATGTACAAACTCTCACAAGAACATTTTGTCTTATTCCTCAGGCTGTGGCTCAAGAGTGCAGTGGACAATGCCACTGCCCTGAAGTGCCGCCCCAGTGTTCACCTGGTGTAAGCCTAGTTCTGGACACCTGTGGGTGCTGCCGGGTGTGTGCCAAGCAGCTGGGCGAGCTGTGCACAGAACGAGATGTTTGCGACCCCCACAAAGGTCTTTACTGTGACTACGGCTCCCCAAGTAACCGTCGTATTGGTGTCTGCACAGGTAAGGATCTTGGCTGTTGAATTACATGTGTCAAATCTTTACTTGATGATCAGAGTCAGAATTGTAAACAATCTTCCATCTCCGTCCCACAGCCAGAGATGGTGCCACTTGTGTGTTTGGTGGAATGGTGTACCGCAGTGGAGAGTCTTTCCAGAGCAG
TTGTAAA/- TACCAGTGCACGTGTCTGGACGGTGCTGTAGGTTGCGTGCCCCTCTGTGGAATGGACATCAGGCTCCCCAGCCCAGACTGCCCAATGCCCCGCAGGGTGAAAGTGCCTGGGAAGTGCTGCGAGGAGTGGGTGTGTGACTCCCCTCGTCAAAACACCTTTGTGGGATCAGCTTTAGCAGGTGAGCATTTCTCAATCTTAAAAGCCAAACTGTGATGGAAAAATTACTCCTAAAGAATGTATTTAGACAAAGTAATGGTCTTGGTATTAGGGGGTTTAGAATGAATATCAGTATAACATCAGATGTAACAATAAGAATAGCAGGATGACATCATGCTGTTGGATGGAATGTGTTGAGTAACATCTTATTGCTTCTTGTAGCTTACAGAGAGGAGGAGACATACGGTCCCGATCCCTCCATGATGAGAGAGAACTGCCTGGTTCAGACTACAGAATGGAGCGCATGCTCAAAAACCTGTGGCTTGGGAATCTCTACTCGTGTG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ccn2abns50/bns50Homozygous♀+/- ♂+/-Fig. 2 from Mokalled et al., 2016
ccn2abns50/+HeterozygousUnknown
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Supplemental Information
Genotyping protocol
None
Citations