Genomic Feature
hg20
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 14: 12099541 - 12099547 (GRCz11) (1) Details
- Nucleotide change
- CTTGTCG/-
- Variant Notes
-
Deletion of 7 bp in exon 2, cDNA:285delCGACAAG; p:R96IfsX27
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted at position 285 in Exon 2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
AGAGGGGCTAATAATTCAGACTTCAACTGTGTATAAATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTATTTATTGGTTATTTATTGGTTATTTATTGGTTATTTATTTATTTATTGGGTATTTATTGGTTATTTATTGGTTATTTATTGAATTACGTTCATTTTTGTATAGCGGGCCAGATTCTATTGATATTTATAAAAAGCCTCGCGGGCCGCCACAAAACTGATTGCGGGCCGCAGATGGCCCGCGGGCCGTAGTTTGGACACGCCTGGTCTACACAAAGAATATCAGCTGATACATTGATGGAACATTTTACTCCCTAATATGAGTATTGCCCTCAAAATAGTATTTTGGTTTGGCTATAGACATTACCAGCACAGATTTCCTAAATAATTAATTAGGGTTAGATAATAAACATGGTCTCACCTTATCCTTTTTAT
CTTGTCG/- GGCATAAGGAAAGCATGGGATGACTGCAGTGACTCTAGTGGCAGATGCTATTTTGCATGCATTAATCATAATCAGAAGTTCCATAAGATTATCATTAATTTCACCACAGCCACTCTGGACAATGTACACATCTTCTCCACGAACACTCTCTCCAATCTCCACACTGCAGAAGACAGAACATGTTAAAGTTACATTAGTAACATGGTAAAAACCTATCTCAGCTGTTTACACAAATTGAAATGCAACATTTAGTTGATAATTCTTAAAATATTATTAAATTGTTCCACGACAAATAAAACGCATGCTCACTAAAGCTAGCTCAGGTCCCTGAAAGGGCCATGACTAGTTCTATTGTTAAGACCAATCTTAACTTCTGCTTCAAACGTATGCGTATGGTCCGGCACAGCCTCCGCCAACGTGCACCTCAAAAAATGTAACTACATATCGCAACGACACGTACTGTAGTGCAAGCTCTGTGATGGGTCAGATTGGTAACGGTG - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
prps1bhg20/hg20 | Homozygous | ♀+/- ♂+/- | text only from Pei et al., 2016 | ||
prps1bhg20/hg20 | Homozygous | ♀-/- | text only from Pei et al., 2016 | ||
prps1bhg20/hg20 (EKW) | Homozygous | ♀+/- ♂+/- |
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Supplemental Information
- Genotyping protocol
- None