Genomic Feature
ihb44
- ID
- ZDB-ALT-150423-1
- Name
- ihb44
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yonghua Sun Lab
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 16: 53714436 - 53714441 (GRCz11) (1) Details
- Nucleotide change
- TCATCA/GATGACGC
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp inserted / 6 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GTATAGCATGTACATGATATATTTCATTCCTCTGCGTACCACCAGAAGGAAGCCTGCGTACCACTAGTGGTACACGTTAGCAGCAGCGAAATCATGCACTGCCCTACACTTTTTTTTCATTTCAAGTAGATGTACTTACCTATCTTACCTTCCGTTTCAAACTTTAACAGTGCTTGGGAAATATTTGAAAAAAAACATATTCACATAAGGATGAATGATTTTTGTATCTCACTGTATGAGTGATTGTTCTGGTGCACTAATGTTATTGTTCCCCATCTCTACAGTCAGCAAATACTGTGAAAAGCTCCGATATGAGCTGGGAAGAGACACTCAGTTCATCACGTCCTACTCTAAAAGTGAGGAGACGCCGCTGGAGGATCTGTACACCGACACGCAGATGGAGCTCCTGAACGACACAGGAGAGAGTTTGGGATATTTACAGAATCTGGACCAACTTTTAGGAGATCATGGAGTCTTCAACCCACAGGCTGAGACTATCT
TCATCA/GATGACGC CGGGTGACGCTGGTGTTGGCAAATCAATCATGCTCCAGAAACTGCAGAATCTGTGGTCCAGACGAGAGCTGAAAACCCGCGCCAAATTCTTCTTCAAGTTCAGATGCAGAGCGTTCAGCGCCTTCAAGGAGACGGATGAGATCTCGCTGAAGGATTTAATCTTCAAGCACAACTGCTATCCAGATGGAGATCCAGATAATGAGGTGTTCGCCTACATCTTACGCTTCCCAGAAACTGTGGTGTTCACTTTCGACGGATACGATGAGCTCCAAATGGATTTCGATTTAGATAATGTGCCGGAAACGGTTTCCCCAGAAGAAAAAACACGACCGCTGCTGCTTCTAATGAATCTGCTCTGTGGGAAACTCCTGAAAGGCTCCAGGAAGATTCTGTCAGCAAGAAGTGGCACTGAAATCCAAAGCCGAGTGATTCGGAAGAAAGTGTTCCTGAAGGGATTTGCACCAGAACACCTGAAGAGATATTTAGCTTTGCATTTCCCC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None
- Wu, X.M., Zhang, J., Li, P.W., Hu, Y.W., Cao, L., Ouyang, S., Bi, Y.H., Nie, P., Chang, M.X. (2020) NOD1 Promotes Antiviral Signaling by Binding Viral RNA and Regulating the Interaction of MDA5 and MAVS. Journal of immunology (Baltimore, Md. : 1950). 204(8):2216-2231
- Hu, Y.W., Wu, X.M., Ren, S.S., Cao, L., Nie, P., Chang, M.X. (2017) NOD1 deficiency impairs CD44a/Lck as well as PI3K/Akt pathway. Scientific Reports. 7:2979
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