Genomic Feature
sa1661
- ID
- ZDB-ALT-120411-236
- Name
- sa1661
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation
- Protocol
- adult males treated with ENU
- Lab of Origin
- Stemple Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 18: 9212625 (GRCz11) (1) Details
- Nucleotide change
- C/A
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- C>A (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
AAAGAACCAAAAGGCAGCCGTTCTGGCATGTAACTCACATTTTCAAAGCTGAATTTCTGACTTAGTATTGTTTTTCAGGTAAACAAGAATATTCACTCAGCATGTTTCTTAACAACTGCAAACATATTATGGTATTTGTATGCTTTAGAAGAGTAAAAAACTTACATACAACACCTTTAAGCCTAGTTTTACTAACAGCCAGTGCAAAAGTTTAGTTTATTTAGGTTTTTAGGCATGGACTCAGTTGTTTTTGCAGCAGACCTTATAACATTTGCATTTATGTTAAAGGTACTCTTACTAAAGTATAGTTTATGGGAGAAGATTAATTTAAGTTTGCATTTACTGGTAACAATTTTAATAAGCGTCCACACTTTCTTACAAGATTATAAAGGGATTGGTTGGATTACCATCACAGATATAAATTAAATCTGATCAGCTTTTGTCTCTCTTATCCCTACAGAGGGCAAGTTCATTTCTGCCCATCCCATCTCAGACACCTA
C/A AATCCTGACGATGACAAGATTTACTTCTTTTTCCGTGAGGCTTCTCGTGATGGGAGCACTACAGACAAGAGCGTGCTGTCTCGTGTCGCCCGGATCTGCAGGGTAAGGCCCGTCCTCACGCTGCCTGATCACAGAGAAACTCACCTCATCTCTCTGATCCTCCTCAGAACTGAAGATTAAATGTGCTTCCTCTGGGGGGAGAGGCTTCCTGGTACGTTTCCCTTGATGTGATCTGCTGAAAGAGGACCAAACCACTGTCAGGCTGGGTAAATCAAAGTAGAGGTCTGGCCATGTAATTGCTGCCTGGACTGTCATTCCTGATCAGATGATCAGAGTCCCTTGGGTTGAGAAATTAATGTGTTAAGTGACTCCATTGTGTTAACACACAGCTTAAAGGGATAGTTCAAAATATGACAATTTAAACACTATTTACTTCCTCAAGTGGTATAATTTTCTTATTTTCTTAATACAAGATTTTTTTTTTTTTAAAAGAAAGCTGA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| sema3dsa1661/sa1661 | Homozygous | ♀+/- ♂+/- | |||
| sema3dsa1661/sa1661 (TL) | Homozygous | ♀+/- ♂+/- | text only from Busch-Nentwich et al., 2012 | ||
| sema3dsa1661/sa1661; p201Tg; p202Tg | Complex | 2 figures  from Taku et al., 2016 | |||
| nrp1asa1485/sa1485; sema3dsa1661/sa1661; p201Tg; p202Tg | Complex | Fig. 5 from Taku et al., 2016 | |||
| nrp1asa1485/+; sema3dsa1661/+; p201Tg; p202Tg | Complex | Fig. 5 from Taku et al., 2016 | |||
| sema3dsa1661/sa1661; nrp2bmn0126Gt/mn0126Gt; p201Tg; p202Tg | Complex | Fig. 5 from Taku et al., 2016 |
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Supplemental Information
- Genotyping protocol
- None
- Taku, A.A., Marcaccio, C.L., Ye, W., Krause, G.J., Raper, J.A. (2016) Attractant and repellent cues cooperate in guiding a subset of olfactory sensory axons to a well-defined protoglomerular target. Development (Cambridge, England). 143:123-32
- Dell, A.L., Fried-Cassorla, E., Xu, H., and Raper, J.A. (2013) cAMP-Induced Expression of Neuropilin1 Promotes Retinal Axon Crossing in the Zebrafish Optic Chiasm. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(27):11076-11088
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