Genomic Feature
s2000
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 9: 38020997 (GRCz11) (1) Details
- Nucleotide change
- A/C
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- T>G (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation: Leu>Stop (1)
- Flanking Sequence
-
TAACTCTGGAATTGAGAGTGAATAAAAACAACATACAGAATCAAAGCGCTACCCATACATTTCATGACCAAAAACACTTTTTTGTTGTACTGCTAAAAAAGGTCACATCTTGGATGACCCTAGTAATGTTGTAATGTTAATTTTGATATAAAACAGCCATTAAAATAAATCTACTACACTCTATTACAAATGGAAAACACGGAGTGGAGCTGGATCAAAGGAATCACAGAACACACAGGTGAAGGTGAATGAAAGTTGCTCCTCTCCACTTACATTGTTTGGTCCAGACCCTGTTGATTCTAGCAAAACTTGATGTTTTTAGTAATTCTAGCAGGAAAGTATGCCCGTCTGACTTTCCTCGTTATTAATTTCTTTACACAACTCTCGTATGTGTAAACAGTCAGAACCGCATGGCTTCTAAAAAAAGAGGTTAACCCAAGCAATAAAGCAATGACAGCGCTTCACTCACCTGCTTCCACAAGAAGACGTCCATGTCGTTT
A/C ACCTCCACGAGATGAGCACATGAATGGCAGACAATATAATCCCAGTGATCACCGCCGCTCTCATCCGCACCGGCAGAAGCGTGTAAATGACGTGGATGAAAAACACGGTCCACCAGATGCCTTCAGACGCGCTCCGCGGCTTGACGAACAGCACGCCGACTACCTGCACGGCCAGCACCAGCAAAATCAGCAAATAACAAACTATCCACATGTGATCCTGATGGAAGCTGTTCCTGTTGCACACCACCATCAGCGTGAGGATGAGCACGATCGCCGCGGTGAAAACCAGCACGAAGGTGAGCTGGCACATCCCTCCGGCGCAGTGGAAGCCCAGCATCACCGCGCACACCAGCACCAGCACGGCCATCAGCATCGTCAGGCTGCTCTGGTTCAGGCGGAAGAAGTAGCGCTGGTAGAGTCTCTCCAACTTCTCCGACTGGAACTTCTTGGACCTGAAAATCTGCATCACGCTGTTGCAGCACGCGCTCATGGAAAAGTTC - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
adcy5s2000/s2000 | Homozygous | Unknown | |||
adcy5s2000/s2000 | Homozygous | ♀+/- ♂+/- | Fig. 9 from Wagle et al., 2011 | ||
adcy5s2000/s2000 (AB) | Homozygous | ♀+/- ♂+/- | 4 figures from Peng et al., 2009 |
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Supplemental Information
- Genotyping protocol
- None
- Wagle, M., Mathur, P., and Guo, S. (2011) Corticotropin-releasing factor critical for zebrafish camouflage behavior is regulated by light and sensitive to ethanol. The Journal of neuroscience : the official journal of the Society for Neuroscience. 31(1):214-224
- Peng, J., Wagle, M., Mueller, T., Mathur, P., Lockwood, B.L., Bretaud, S., and Guo, S. (2009) Ethanol-modulated camouflage response screen in zebrafish uncovers a novel role for cAMP and extracellular signal-regulated kinase signaling in behavioral sensitivity to ethanol. The Journal of neuroscience : the official journal of the Society for Neuroscience. 29(26):8408-8418
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