ZFIN ID: ZDB-PERS-191022-1
James, David
Email: djames4@uoregon.edu
URL:
Affiliation: Eisen Lab
Address:
Country: United States
Phone:
Fax:
ORCID ID:


BIOGRAPHY AND RESEARCH INTERESTS
David James is a current post-doc in the labs of Judith Eisen and Karen Guillemin, where he studies the relationship between neurodevelopment and the microbiome. He received his PhD in biology/neurobiology from the Department of Biology, University of Miami.


PUBLICATIONS
Kozol, R.A., James, D.M., Varela, I., Sumathipala, S.H., Züchner, S., Dallman, J.E. (2021) Restoring Shank3 in the rostral brainstem of shank3ab-/- zebrafish autism models rescues sensory deficits. Communications biology. 4:1411
James, D.M., Davidson, E.A., Yanes, J., Moshiree, B., Dallman, J.E. (2021) The Gut-Brain-Microbiome Axis and Its Link to Autism: Emerging Insights and the Potential of Zebrafish Models. Frontiers in cell and developmental biology. 9:662916
James, D.M., Kozol, R.A., Kajiwara, Y., Wahl, A.L., Storrs, E.C., Buxbaum, J.D., Klein, M., Moshiree, B., Dallman, J.E. (2019) Intestinal dysmotility in a zebrafish (Danio rerio) shank3a;shank3b mutant model of autism. Molecular autism. 10:3
Kozol, R.A., Abrams, A.J., James, D.M., Buglo, E., Yan, Q., Dallman, J.E. (2016) Function Over Form: Modeling Groups of Inherited Neurological Conditions in Zebrafish. Frontiers in molecular neuroscience. 9:55

NON-ZEBRAFISH PUBLICATIONS
Nirmala Mavila · Andrew Trecartin · Ryan Spurrier · Yi Xiao · Xiaogang Hou · David James · Xiaowei Fu · Brian Truong · Clara Wang · Gerald S. Lipshutz · Kasper S. Wang2 · Tracy C. Grikscheit, Functional human and murine Tissue Engineered Liver is generated from adult stem/progenitor cells, Stem Cells Translational Medicine, 2017 Jan 6, doi: 10.5966/sctm.2016-0205

David James · Cecilia A. Prator · Gary G. Martin · Joseph R. Schulz, Morphology of sensory papillae on the feeding proboscis of cone snails (Mollusca, Gastropoda), Invertebrate Biology, 2014 May 5, DOI: 10.1111/ivb.12058

Nirmala Mavila · David James · Pranavkumar Shivakumar · Marie V. Nguyen · Sarah Utley · Katrina Mak · Allison Wu · Shengmei Zhou · Larry Wang · Christopher Vendyres · Megan Groff · Kinji Asahina · Kasper S Wang, Expansion of PROMININ-1-expressing cells in association with fibrosis of biliary atresia, Hepatology, 2014 Jul 17, doi: 10.1002/hep.27203

Ingrid Lua · David James · Jiaohong Wang · Kasper S Wang · Kinji Asahina, Mesodermal Mesenchymal Cells Give Rise to Myofibroblasts, but Not Epithelial Cells, in Mouse Liver Injury, Hepatology, 2014 April 28, doi: 10.1002/hep.27035

Marie V. Nguyen · Nirmala Mavila · David James · Kasper S. Wang, PROMININ-1-expressing Progenitor Cells undergo Transforming Growth Factor-B (TGFB)-mediated Transdifferentiation into Myofibroblasts during Biliary Fibrosis, Journal of the American College of Surgeons, 2014 Aug 22, doi.org/10.1016/j.jamcollsurg.2014.07.169

N. Mavila · R.G. Spurrier · C.V. Wang · David James · E. Barthel · S. Utley · T.C. Grikscheit · K.S. Wang, Tissue-Engineered Liver Derived from Organ-Specific Stem Cells Demonstrates Bile Ducts and Albumin Production, Journal of Surgical Research, 2014 Feb, DOI: 10.1016/j.jss.2013.11.676

Sarah Utley · David James · Nirmala Mavila · Marie V Nguyen · Christopher Vendryes · S. Michael Salisbury · Jennifer Phan · Kasper S Wang, Fibroblast Growth Factor signaling regulates the expansion of A6-expressing hepatocytes in association with AKT-dependent β-catenin activation, Hepatology 2013 Dec 21, doi: 10.1016/j.jhep.2013.12.017

N. Mavila · David James · P. Shivakumar · S. Utley · A. Wu · K. Mak · C. Vendyres · J. Bezerra · K. Wang, Fgfr-Akt-Beta-Catenin and Tgfbeta-Smad3 Signaling Pathways are Associated With Expansion and Epithelial-Mesenchyme Trans-Differentiation of Cd133pos Cd49fpos Cells in Murine Model of Biliary Atresia, Journal of Surgical Research, 2013 Feb, doi.org/10.1016/j.jss.2012.10.493

Nirmala Mavila · David James · Sarah Utley · Nguyen Cu · Orly Coblens · Katrina Mak · C Bart Rountree · Michael Kahn · Kasper S Wang, Fibroblast Growth Factor Receptor-Mediated Activation of AKT-β-Catenin-CBP Pathway Regulates Survival and Proliferation of Murine Hepatoblasts and Hepatic Tumor Initiating Stem Cells, PLoS ONE, 2012 Nov 30 doi.org/10.1371/journal.pone.0050401

S. Utley · C. Vendryes · David James · N. Mavila · M. Salisbury · J.C. Phan · K. Wang, Fgf Signaling Promotes the Expansion of an A6/Hnf4alpha Co-Expressing Progenitor Cell Population During DDC-Induced Liver Injury Via Downstream Akt-Dependent Beta-Catenin Activation, Journal of Surgical Research, 2012 Feb, doi.org/10.1016/j.jss.2012.10.181

Sarah B. Utley · David M. James · Nirmala Mavila · Jenn C. Phan, Fibroblast growth factor and Notch signaling are associated with hepatic progenitor cell expansion after chronic liver injury, Journal of the American College of Surgeons, 2011 Sept, 10.1016/j.jamcollsurg.2011.06.227

S. Utley · T. Berg · David James · S.M. Salisbury · J. Phan · G. Lam · S. Sullivan · N. Mavila · C. Vendryes · K. Wang, Postnatally Induced Over-Expression of Fgf10 Promotes Notch Activation and Murine Hepatic Progenitor Cell Expansion, Journal of Surgical Research, 2011

C. L. Vendryes · S. Utley · J. Phan · N. Mavila · David James · K. Wang, Fibroblast Growth Factor Signaling Is Associated With Hepatic Progenitor Cell Expansion In A Model of DDC Liver Injury, Journal of Surgical Research, 2010, 10.1016/j.jss.2010.11.530
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