ZFIN ID: ZDB-LAB-151112-3
Pauli Lab
PI/Director: Pauli, Andrea
Contact Person: Pauli, Andrea
Email: andrea.pauli@imp.ac.at
URL: http://paulilab.org
Address: IMP (Institute of Molecular Pathology) Campus-Vienna-Biocenter 1 1030 Vienna
Country: Austria
Phone: +43-1-79730-3500
Fax: +43 1 798 71 53
Line Designation: vbc

Show all 16 genomic features

Function of short peptides and translational regulation during embryogenesis

Chugunova, Anastasia Post-Doc Deneke, Victoria Post-Doc Lorenzo-Orts, Laura Post-Doc
Blaha, Andeas Graduate Student Cabrera Quio, Luis Enrique Graduate Student Gert, Krista Graduate Student
Leesch, Katrin Frienderike Graduate Student Stock, Jessica Graduate Student Panser, Karin Research Staff

Cabrera-Quio, L.E., Schleiffer, A., Mechtler, K., Pauli, A. (2021) Zebrafish Ski7 tunes RNA levels during the oocyte-to-embryo transition. PLoS Genetics. 17:e1009390
Kamieniarz-Gdula, K., Gdula, M.R., Panser, K., Nojima, T., Monks, J., Wiƛniewski, J.R., Riepsaame, J., Brockdorff, N., Pauli, A., Proudfoot, N.J. (2019) Selective Roles of Vertebrate PCF11 in Premature and Full-Length Transcript Termination. Molecular Cell. 74(1):158-172.e9
Herberg, S., Gert, K.R., Schleiffer, A., Pauli, A. (2018) The Ly6/uPAR protein Bouncer is necessary and sufficient for species-specific fertilization. Science (New York, N.Y.). 361:1029-1033
Norris, M.L., Pauli, A., Gagnon, J.A., Lord, N.D., Rogers, K.W., Mosimann, C., Zon, L.I., Schier, A.F. (2017) Toddler signaling regulates mesodermal cell migration downstream of Nodal signaling. eLIFE. 6
Freyer, L., Hsu, C.W., Nowotschin, S., Pauli, A., Ishida, J., Kuba, K., Fukamizu, A., Schier, A.F., Hoodless, P.A., Dickinson, M.E., Hadjantonakis, A.K. (2017) Loss of Apela Peptide in Mice Causes Low Penetrance Embryonic Lethality and Defects in Early Mesodermal Derivatives. Cell Reports. 20:2116-2130
Chew, G.L., Pauli, A., Schier, A.F. (2016) Conservation of uORF repressiveness and sequence features in mouse, human and zebrafish. Nature communications. 7:11663
Pauli, A., Montague, T.G., Lennox, K.A., Behlke, M.A., Schier, A.F. (2015) Antisense Oligonucleotide-Mediated Transcript Knockdown in Zebrafish. PLoS One. 10:e0139504
Pauli, A., Valen, E., Schier, A.F. (2015) Identifying (non-)coding RNAs and small peptides: Challenges and opportunities. BioEssays : news and reviews in molecular, cellular and developmental biology. 37(1):103-12
Rabani, M., Raychowdhury, R., Jovanovic, M., Rooney, M., Stumpo, D.J., Pauli, A., Hacohen, N., Schier, A.F., Blackshear, P.J., Friedman, N., Amit, I., Regev, A. (2014) High-Resolution Sequencing and Modeling Identifies Distinct Dynamic RNA Regulatory Strategies. Cell. 159(7):1698-710
Gagnon, J.A., Valen, E., Thyme, S.B., Huang, P., Ahkmetova, L., Pauli, A., Montague, T.G., Zimmerman, S., Richter, C., Schier, A.F. (2014) Efficient Mutagenesis by Cas9 Protein-Mediated Oligonucleotide Insertion and Large-Scale Assessment of Single-Guide RNAs. PLoS One. 9:e98186
Pauli, A., Norris, M.L., Valen, E., Chew, G.L., Gagnon, J.A., Zimmerman, S., Mitchell, A., Ma, J., Dubrulle, J., Reyon, D., Tsai, S.Q., Joung, J.K., Saghatelian, A., and Schier, A.F. (2014) Toddler: an embryonic signal that promotes cell movement via Apelin receptors. Science (New York, N.Y.). 343(6172):1248636
Zhang, Y., Vastenhouw, N.L., Feng, J., Fu, K., Wang, C., Ge, Y., Pauli, A., van Hummelen, P., Schier, A.F., and Liu, X.S. (2014) Canonical nucleosome organization at promoters forms during genome activation. Genome research. 24(2):260-6
Chew, G.L., Pauli, A., Rinn, J.L., Regev, A., Schier, A.F., and Valen, E. (2013) Ribosome profiling reveals resemblance between long non-coding RNAs and 5' leaders of coding RNAs. Development (Cambridge, England). 140(13):2828-2834
Pauli, A., Valen, E., Lin, M.F., Garber, M., Vastenhouw, N.L., Levin, J.Z., Fan, L., Sandelin, A., Rinn, J.L., Regev, A., and Schier, A.F. (2012) Systematic identification of long non-coding RNAs expressed during zebrafish embryogenesis. Genome research. 22(3):577-591