ZFIN is now using GRCz12tu for Genomic Data
Gene
clasp1a
- ID
- ZDB-GENE-081104-520
- Name
- cytoplasmic linker associated protein 1a
- Symbol
- clasp1a Nomenclature History
- Previous Names
-
- si:dkey-219c10.5
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in establishment of cell polarity and negative regulation of microtubule depolymerization. Predicted to be located in Golgi apparatus; centrosome; and spindle. Human ortholog(s) of this gene implicated in respiratory system disease. Orthologous to human CLASP1 (cytoplasmic linker associated protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR024395 | CLASP N-terminal domain |
| Domain | IPR034085 | TOG domain |
| Domain | IPR057546 | Stalled ribosome sensor GCN1-like, HEAT repeats region |
| Homologous_superfamily | IPR011989 | Armadillo-like helical |
| Homologous_superfamily | IPR016024 | Armadillo-type fold |
| Repeat | IPR021133 | HEAT, type 2 |
Domain Details Per Protein
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
clasp1a-202
(1)
|
Ensembl | 896 nt | ||
| mRNA |
clasp1a-201
(1)
|
Ensembl | 4,608 nt | ||
| mRNA |
clasp1a-203
(1)
|
Ensembl | 6,762 nt | ||
| mRNA |
clasp1a-204
(1)
|
Ensembl | 190 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers