ZFIN is now using GRCz12tu for Genomic Data
Gene
slc30a9
- ID
- ZDB-GENE-040724-254
- Name
- solute carrier family 30 member 9
- Symbol
- slc30a9 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable zinc:proton antiporter activity. Predicted to be involved in intracellular zinc ion homeostasis; regulation of mitochondrion organization; and zinc ion transport. Predicted to be located in cytoplasmic vesicle; mitochondrial membrane; and nucleus. Predicted to be active in endoplasmic reticulum. Orthologous to human SLC30A9 (solute carrier family 30 member 9).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7153183 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Birk-Landau-Perez syndrome | 617595 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR058533 | Cation efflux protein, transmembrane domain |
| Family | IPR002524 | Cation efflux |
| Family | IPR040177 | Proton-coupled zinc antiporter SLC30A9 |
| Homologous_superfamily | IPR009061 | Putative DNA-binding domain superfamily |
| Homologous_superfamily | IPR027469 | Cation efflux transmembrane domain superfamily |
| Homologous_superfamily | IPR037129 | XPA domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cation efflux | Cation efflux protein, transmembrane domain | Cation efflux transmembrane domain superfamily | Proton-coupled zinc antiporter SLC30A9 | Putative DNA-binding domain superfamily | XPA domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q5PQZ3 | InterPro | 573 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
slc30a9-202
(1)
|
Ensembl | 505 nt | ||
| mRNA |
slc30a9-201
(1)
|
Ensembl | 3,259 nt | ||
| mRNA |
slc30a9-203
(1)
|
Ensembl | 561 nt | ||
| mRNA |
slc30a9-204
(1)
|
Ensembl | 4,912 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers