ZFIN is now using GRCz12tu for Genomic Data
Gene
ggps1
- ID
- ZDB-GENE-030131-8742
- Name
- geranylgeranyl diphosphate synthase 1
- Symbol
- ggps1 Nomenclature History
- Previous Names
-
- fb05f09
- wu:fb05f09
- zgc:101591
- zgc:56514 (1)
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable geranylgeranyl diphosphate synthase activity. Predicted to be involved in isoprenoid biosynthetic process. Human ortholog(s) of this gene implicated in sensorineural hearing loss. Orthologous to human GGPS1 (geranylgeranyl diphosphate synthase 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:56514 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Muscular dystrophy, congenital hearing loss, and ovarian insufficiency syndrome | 619518 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Isoprenoid synthase domain superfamily | Polyprenyl synthetase, conserved site | Polyprenyl synthetase-like |
|---|---|---|---|---|---|
| UniProtKB:A0A8M6Z9I5 | InterPro | 350 | |||
| UniProtKB:F1R4B6 | InterPro | 284 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers