ZFIN is now using GRCz12tu for Genomic Data
Gene
cald1a
- ID
- ZDB-GENE-030131-1629
- Name
- caldesmon 1a
- Symbol
- cald1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 4 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable actin binding activity; calmodulin binding activity; and myosin binding activity. Acts upstream of or within peristalsis and swimming behavior. Is expressed in intestinal epithelium and intestine. Orthologous to human CALD1 (caldesmon 1).
- Genome Resources
- Note
-
cald1l2 was merge with cald1a after it was determined that the cald1l2 is actually the first exon of cald1a.
- Comparative Information
-
- All Expression Data
- 6 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Caldesmon | Caldesmon/lymphocyte specific protein |
|---|---|---|---|---|
| UniProtKB:B0BLV5 | InterPro | 518 | ||
| UniProtKB:A0A8M9PU64 | InterPro | 608 | ||
| UniProtKB:A0A8M9Q078 | InterPro | 530 | ||
| UniProtKB:A0AC58J5D2 | InterPro | 608 | ||
| UniProtKB:A0AC58J5D8 | InterPro | 518 | ||
| UniProtKB:A0AC58J5E0 | InterPro | 518 | ||
| UniProtKB:A0AC58J5E3 | InterPro | 530 | ||
| UniProtKB:A0AC58J5E4 | InterPro | 608 | ||
| UniProtKB:A0AC58J5F8 | InterPro | 518 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| ncRNA |
cald1l2-001
(1)
|
Ensembl | 101 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers