Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
9	52.3 cM	z13213	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
9	2718.0 cR	z13213	Goodfellow T51 (T51)	Geisler, Robert	Data
9	60.1 cM	z13213	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
Df(Chr9:epb41l5,ptpn4a,tmem177,pth2ra,hs6st3b,ramp1)b476	Feature	9	1.5 cM	Jensen, 2000
vangl1	GENE	9		Jessen et al., 2004	Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9  ... Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9 adjacent to the casq2 gene using the Goodfellow T51 radiation hybrid panel. The genes were located between z13213 and z559.
casq2	GENE	9		Jessen et al., 2004	Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9  ... Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9 adjacent to the casq2 gene using the Goodfellow T51 radiation hybrid panel. The genes were located between z13213 and z559.
z559	SSLP	9		Jessen et al., 2004	Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9  ... Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9 adjacent to the casq2 gene using the Goodfellow T51 radiation hybrid panel. The genes were located between z13213 and z559.

OTHER MAPPING INFORMATION

Chr 9 Jessen et al., 2004 Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9 adjacent to the casq2  ... Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9 adjacent to the casq2 gene using the Goodfellow T51 radiation hybrid panel. The genes were located between z13213 and z559.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	177,0,179		60.0
Forward Primer	TCGGCAGGGCTTTTCACT
Reverse Primer	GTTAGTCTCCTCGACGGCTG
IND	209,191,0,211		60.0
Forward Primer	TCGGCAGGGCTTTTCACT
Reverse Primer	GTTAGTCTCCTCGACGGCTG
EKW	223,179		60.0
Forward Primer	TCGGCAGGGCTTTTCACT
Reverse Primer	GTTAGTCTCCTCGACGGCTG
TU	175,0,189		60.0
Forward Primer	TCGGCAGGGCTTTTCACT
Reverse Primer	GTTAGTCTCCTCGACGGCTG