ZFIN ID: ZDB-GENE-041124-2

ZFIN ID: ZDB-GENE-041124-2

Mapping Details

Gene Name:	exostosin-like glycosyltransferase 3
Symbol:	extl3

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	20	53,148,460 - 53,225,887	GRCz12tu
NCBI Map Viewer	20	53,148,460 - 53,225,887	GRCz12tu
Ensembl	20	49,940,818 - 50,014,936	GRCz11
NCBI Map Viewer	20	49,937,995 - 50,014,992	GRCz11
UCSC	20	-	GRCz11
Vega	20	50,137,614 - 50,211,732	GRCv10

Mapped Clones containing extl3
CH73-305E1	Chr: 20 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa17419	20	53,171,290	GRCz12tu	DIRECT		Sealy et al., 2025
	20	49,960,719	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	20	50,157,515	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	20	50,272,572	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa23818	20	53,163,760	GRCz12tu	DIRECT		Sealy et al., 2025
	20	49,953,189	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	20	50,149,985	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	20	50,265,042	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa43541	20	53,151,877	GRCz12tu	DIRECT		Sealy et al., 2025
	20	49,941,412	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	20	50,138,208	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	20	50,253,265	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa17419	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa23818	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa43541	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
te242	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
tg308c	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
tm4	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
tm70g	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	20		GRCz11	OTHER_MAPPING	linkagesDirectMem2
tm317c	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
to232	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
tp67z	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
tw24	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	20		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z5335	SSLP	20	0.54 cM	Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
z14543	SSLP	20	3.26 cM	Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
z56034	SSLP	20	4.24 cM	Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
fj59a01	EST	20		Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
tm70g	Feature	20	0.0 cM	Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.

Genomic Feature tm70g is an allele of extl3

Marker	Type	Chr	Distance	Publication / Person	Comments
extl3	GENE	20	0.0 cM	Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
fj59a01	EST	20	0.76 cM	Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
z5335	SSLP	20		Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
z14543	SSLP	20		Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.
z56034	SSLP	20		Lee et al., 2004	Lee et al. (2004, Neuron 44(6):947-960) report mapping box^tm70g to LG 20 using genome scanning by hybidization to a SNP microarray chip. A meiotic panel was used to further localize the locus.