ZFIN ID: ZDB-GENE-041105-6

Mapping Details

Gene Name:	procollagen, type V, alpha 1
Symbol:	col5a1

PHYSICAL MAP AND BROWSER

Genome Assembly: GRCz12tuChromosome: 21

Genome Browser	Chr	Position	Assembly
ZFIN	21	7,784,317 - 8,013,429	GRCz12tu
NCBI Map Viewer	21	7,784,317 - 8,013,429	GRCz12tu
Ensembl	21	6,556,635 - 6,725,780	GRCz11
NCBI Map Viewer	21	6,556,581 - 6,725,542	GRCz11
Vega	21	6,634,384 - 6,803,529	GRCv10

Mapped Clones containing col5a1
CH73-331J9	Chr: 21 Details
DKEY-87M23	Chr: 21 Details
CH73-165E7	Chr: 21 Details
CH1073-153C9	Chr: 21 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
ca109	21	6,611,607 - 6,611,610	GRCz11	DIRECT		Rajan et al., 2020
sa4934	21	7,914,107	GRCz12tu	DIRECT		Sealy et al., 2025
	21	6,625,207	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	6,702,956	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	6,581,864	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa5957	21	7,930,097	GRCz12tu	DIRECT		Sealy et al., 2025
	21	6,642,759	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	6,720,508	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	6,599,416	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa23852	21	7,926,335	GRCz12tu	DIRECT		Sealy et al., 2025
	21	6,638,998	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	6,716,747	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	6,595,655	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa37227	21	7,898,181	GRCz12tu	DIRECT		Sealy et al., 2025
	21	6,609,998	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	6,687,747	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	6,566,655	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa37228	21	7,902,801	GRCz12tu	DIRECT		Sealy et al., 2025
	21	6,613,841	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	6,691,590	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	6,570,498	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa43580	21	7,930,098	GRCz12tu	DIRECT		Sealy et al., 2025
	21	6,642,760	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	6,720,509	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	6,599,417	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa45726	21	7,948,535	GRCz12tu	DIRECT		Sealy et al., 2025
	21	6,660,750	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	6,738,499	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	6,617,407	Zv9	DIRECT		Busch-Nentwich et al., 2013
la028380Tg	21	6,658,882 - 6,658,892	Zv9	ZFIN_Zv9	BurgessLin
ca109	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
la028380Tg	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa4934	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa5957	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa23852	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa37227	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa37228	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa43580	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa45726	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available