ZFIN ID: ZDB-GENE-030605-1

Mapping Details

Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a
Symbol: smarca4a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 3 19,245,804 - 19,281,878 GRCz11
Ensembl 3 19,245,804 - 19,281,878 GRCz11
Vega 3 19,096,064 - 19,132,138 GRCv10
NCBI Map Viewer 3 19,245,782 - 19,281,878 GRCz11
UCSC 3 - GRCv10
Mapped Clones containing smarca4a
CH211-224D23 Chr: 3 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
a8 3 19,256,681 GRCz11 Gregg et al., 2003
hzu13 3 19,249,129 - 19,249,135 GRCz11 Tu et al., 2020
sa12514 3 19,262,441 GRCz11 Busch-Nentwich et al., 2013
3 19,112,701 GRCz10 Busch-Nentwich et al., 2013
3 19,084,339 Zv9 Busch-Nentwich et al., 2013
sa19981 3 19,267,969 GRCz11 Busch-Nentwich et al., 2013
3 19,118,229 GRCz10 Busch-Nentwich et al., 2013
3 19,089,867 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
3 38.9 cM smarca4 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Genomic Feature s481 is an allele of smarca4a
Marker Type Chr Distance Publication / Person Comments
z59420 SSLP 3 Takeuchi et al., 2011 Taeuchi et al. (2011, Nat. Commun. 2:187) mapped s481 to Chr.3 using SSLP  ...
z5623 SSLP 3 Takeuchi et al., 2011 Taeuchi et al. (2011, Nat. Commun. 2:187) mapped s481 to Chr.3 using SSLP  ...
Genomic Feature a8 is an allele of smarca4a
Marker Type Chr Distance Publication / Person Comments
z1140 SSLP 3 Gregg et al., 2003
z5623 SSLP 3 Gregg et al., 2003
Genomic Feature s481 is an allele of smarca4a
Chr 3 Takeuchi et al., 2011 Taeuchi et al. (2011, Nat. Commun. 2:187) mapped s481 to Chr.3 using SSLP markers.
Genomic Feature a8 is an allele of smarca4a
Chr 3 Gregg et al., 2003