ZFIN ID: ZDB-GENE-030516-3

ZFIN ID: ZDB-GENE-030516-3

Mapping Details

Gene Name:	collagen type XVIII alpha 1 chain a
Symbol:	col18a1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	9	43,551,367 - 43,709,666	GRCz12tu
NCBI Map Viewer	9	43,551,367 - 43,709,666	GRCz12tu
Ensembl	9	41,821,613 - 41,979,505	GRCz11
NCBI Map Viewer	9	41,821,613 - 41,979,505	GRCz11
UCSC	9	-	GRCz11
Vega	9	42,019,826 - 42,177,718	GRCv10

Mapped Clones containing col18a1a
DKEYP-30E7	Chr: 9 Details
DKEY-237E16	Chr: 9 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa34722	9	43,699,230	GRCz12tu	DIRECT		Sealy et al., 2025
	9	41,969,073	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	9	42,167,286	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	9	43,042,116	Zv9	DIRECT		Busch-Nentwich et al., 2013
la026994Tg	9	42,902,315 - 42,902,325	Zv9	ZFIN_Zv9	BurgessLin
la026995Tg	9	42,910,452 - 42,910,462	Zv9	ZFIN_Zv9	BurgessLin
la026996Tg	9	42,986,526 - 42,986,536	Zv9	ZFIN_Zv9	BurgessLin
la029609Tg	9	42,898,772 - 42,898,782	Zv9	ZFIN_Zv9	BurgessLin
la029610Tg	9	42,966,922 - 42,966,932	Zv9	ZFIN_Zv9	BurgessLin
la026994Tg	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
la026995Tg	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
la026996Tg	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
la029609Tg	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
la029610Tg	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa34722	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	9		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	9		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
9	87.5 cM	col18a1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by col18a1a
fb47h10 Chr: 9 Details