ZFIN ID: ZDB-GENE-030113-3

Mapping Details

Gene Name:	calpain, small subunit 1 a
Symbol:	capns1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	5	37,554,372 - 37,565,244	GRCz12tu
NCBI Map Viewer	5	37,554,372 - 37,565,244	GRCz12tu
Ensembl	5	36,654,817 - 36,665,694	GRCz11
NCBI Map Viewer	5	36,654,819 - 36,665,691	GRCz11
UCSC	5	-	GRCz11
Vega	5	36,054,664 - 36,065,541	GRCv10

Mapped Clones containing capns1a
CH211-222C22	Chr: 5 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa6992	5	37,554,513	GRCz12tu	DIRECT		Sealy et al., 2025
	5	36,654,960	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	5	36,054,807	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	5	38,255,123	Zv9	DIRECT		Busch-Nentwich et al., 2013
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	5		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
5	78.9 cM	capns1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by capns1a
fb81g08 Chr: 5 Details