ZFIN ID: ZDB-GENE-030321-1

Mapping Details

Gene Name: GLI family zinc finger 1
Symbol: gli1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
NCBI Map Viewer 6 59,426,148 - 59,505,589 GRCz11
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa8554 6 59,439,991 GRCz11 Busch-Nentwich et al., 2013
6 59,444,779 GRCz10 Busch-Nentwich et al., 2013
1 30,733,084 Zv9 Busch-Nentwich et al., 2013
sa31210 6 59,429,619 GRCz11 Busch-Nentwich et al., 2013
6 59,434,407 GRCz10 Busch-Nentwich et al., 2013
1 30,743,456 Zv9 Busch-Nentwich et al., 2013
sa32697 6 59,429,344 GRCz11 Busch-Nentwich et al., 2013
6 59,434,132 GRCz10 Busch-Nentwich et al., 2013
1 30,743,731 Zv9 Busch-Nentwich et al., 2013
sa38271 6 59,432,800 GRCz11 Busch-Nentwich et al., 2013
6 59,437,588 GRCz10 Busch-Nentwich et al., 2013
1 30,740,275 Zv9 Busch-Nentwich et al., 2013
la028128Tg 1 30,721,580 - 30,721,590 Zv9

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
6 154.0 cM gli1 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z3581 SSLP 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.
z4910 SSLP 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.
z4950 SSLP 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.
ts269 Feature 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.

OTHER MAPPING INFORMATION
Chr 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to  ...
Genomic Feature tm276b is an allele of gli1
Chr Location Mapped As Panel Mapped By Scoring
6 85.3 cM tm276b Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
Genomic Feature ts269 is an allele of gli1
Marker Type Chr Distance Publication / Person Comments
gli1 GENE 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.
z3581 SSLP 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.
z4910 SSLP 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.
z4950 SSLP 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to the gli1 gene on Linkage Group 6.
Genomic Feature ts269 is an allele of gli1
Chr 6 Karlstrom et al., 2003 Karlstrom et al. (2003) used centromere linkage analysis to map the detour (dtr) locus to  ...
Genomic Feature te370a is an allele of gli1