ZFIN ID: ZDB-GENE-021021-2

Mapping Details

Gene Name: T cell leukemia homeobox 1
Symbol: tlx1
PHYSICAL MAP AND BROWSER
Genome Assembly: GRCz12tuChromosome: 13
Genome Browser Chr Position Assembly
ZFIN 13 31,653,419 - 31,657,836 GRCz12tu
NCBI Map Viewer 13 31,653,419 - 31,657,836 GRCz12tu
Ensembl 13 28,267,997 - 28,272,299 GRCz11
NCBI Map Viewer 13 28,267,966 - 28,272,327 GRCz11
UCSC 13 - GRCz11
Vega 13 28,137,547 - 28,141,849 GRCv10
Mapped Clones containing tlx1
BUSM1-265N4 Chr: 13 Details
BUSM1-46P4 Chr: 13 Details
CH211-103O12 Chr: 13 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
cq201 13 28,271,935 - 28,271,962 GRCz11 DIRECT Xie et al., 2019
cq202 13 28,271,942 - 28,271,943 GRCz11 DIRECT Xie et al., 2019
sa11549 13 31,656,114 GRCz12tu DIRECT Sealy et al., 2025
13 28,270,605 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 28,140,155 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 28,494,207 Zv9 DIRECT Busch-Nentwich et al., 2013
sa22315 13 31,656,018 GRCz12tu DIRECT Sealy et al., 2025
13 28,270,509 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 28,140,059 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 28,494,111 Zv9 DIRECT Busch-Nentwich et al., 2013
zf3887 13 28,271,941 - 28,272,062 GRCz11 DIRECT Liu et al., 2022
zf3888 13 28,270,583 GRCz11 DIRECT Liu et al., 2022
zf3889 13 28,270,586 GRCz11 DIRECT Liu et al., 2022
cq201 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
cq202 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
ihb184 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
ihb185 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa11549 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa22315 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
zf3887 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
zf3888 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
zf3889 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z20379 SSLP 13 Langenau et al., 2002 Langenau, et al. (2002. Mech Dev 117:243-248.) report mapping tlx1 to LG13 between fb79b10 and z20379 on the T51 mapping panel.
fb79b10 EST 13 Langenau et al., 2002 Langenau, et al. (2002. Mech Dev 117:243-248.) report mapping tlx1 to LG13 between fb79b10 and z20379 on the T51 mapping panel.

OTHER MAPPING INFORMATION
Chr 13 Langenau et al., 2002 Langenau, et al. (2002. Mech Dev 117:243-248.) report mapping tlx1 to LG13 between fb79b10  ...
Genomic Feature zf3887 is an allele of tlx1
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