ZFIN ID: ZDB-GENE-040624-5

Mapping Details

Gene Name:	CCCTC-binding factor (zinc finger protein)
Symbol:	ctcf

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	18	23,676,525 - 23,683,897	GRCz12tu
NCBI Map Viewer	18	23,676,525 - 23,683,897	GRCz12tu
Ensembl	18	22,285,992 - 22,293,372	GRCz11
NCBI Map Viewer	18	22,286,011 - 22,293,383	GRCz11
UCSC	18	-	GRCz11
Vega	18	22,296,926 - 22,304,306	GRCv10

Mapped Clones containing ctcf
DKEY-6E12	Chr: 18 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi870Tg	18	22,286,376 - 22,286,377	GRCz11	DIRECT		ZFIN Curated Data
sa14093	18	23,681,996	GRCz12tu	DIRECT		Sealy et al., 2025
	18	22,291,482	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	18	22,302,416	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	18	22,072,193	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa45637	18	23,682,146	GRCz12tu	DIRECT		Sealy et al., 2025
	18	22,291,632	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	18	22,302,566	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	18	22,072,343	Zv9	DIRECT		Busch-Nentwich et al., 2013
zf3435Tg	18	22,288,203 - 22,288,204	GRCz11	DIRECT		Pérez-Rico et al., 2020
hi870Tg	18		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa14093	18		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa45637	18		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
upo370	18		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zf3435Tg	18		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available

Genomic Feature upo370 is an allele of ctcf