ZFIN ID: ZDB-GENE-011212-6

ZFIN ID: ZDB-GENE-011212-6

Mapping Details

Gene Name:	transcription factor AP-2 alpha
Symbol:	tfap2a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	24	9,069,841 - 9,080,682	GRCz12tu
NCBI Map Viewer	24	9,069,841 - 9,080,682	GRCz12tu
NCBI Map Viewer	24	8,721,676 - 8,732,517	GRCz11

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
m610	24	8,723,081	GRCz11	DIRECT		Barrallo Gimeno et al., 2004
m780	24	8,723,081	GRCz11	DIRECT		Holzschuh et al., 2003
m819	24	8,725,169	GRCz11	DIRECT		ZFIN Curated Data
nt30	24	8,729,222	GRCz11	DIRECT		Chambers et al., 2019
sa24445	24	9,073,860	GRCz12tu	DIRECT		Sealy et al., 2025
	24	8,725,695	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	24	8,585,317	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	24	8,525,292	Zv9	DIRECT		Busch-Nentwich et al., 2013
ts213	24	8,725,093	GRCz11	DIRECT		Knight et al., 2003
	24		GRCz11	GENERAL_LOAD	load data [singleton]
m610	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	24		GRCz11	OTHER_MAPPING	linkagesDirectMem2
m780	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
m819	24		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	24		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
nt30	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa24445	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
tfap2a_unspecified	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
ts213	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	24		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	24		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
24	34.8 cM	tfap2a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z13695	SSLP	24		Holzschuh et al., 2003	Holzschuh et al. (2003, Development 130: 5741-5754) report mapping mob^m819 to LG24 between SSLP markers z23011 and z13695 using bulk segregant analysis. mob^m819 linked to tfap2a through RFLP analysis.
z23011	SSLP	24		Holzschuh et al., 2003	Holzschuh et al. (2003, Development 130: 5741-5754) report mapping mob^m819 to LG24 between SSLP markers z23011 and z13695 using bulk segregant analysis. mob^m819 linked to tfap2a through RFLP analysis.
m819	Feature	24	0.18 cM	Holzschuh et al., 2003	Holzschuh et al. (2003, Development 130: 5741-5754) report mapping mob^m819 to LG24 between SSLP markers z23011 and z13695 using bulk segregant analysis. mob^m819 linked to tfap2a through RFLP analysis.

Markers Encoded by tfap2a
fb83f04 Chr: 24 Details

Genomic Feature m819 is an allele of tfap2a

Marker	Type	Chr	Distance	Publication / Person	Comments
tfap2a	GENE	24	0.18 cM	Holzschuh et al., 2003	Holzschuh et al. (2003, Development 130: 5741-5754) report mapping mob^m819 to LG24 between SSLP markers z23011 and z13695 using bulk segregant analysis. mob^m819 linked to tfap2a through RFLP analysis.
z23011	SSLP	24	2.04 cM	Holzschuh et al., 2003	Holzschuh et al. (2003, Development 130: 5741-5754) report mapping mob^m819 to LG24 between SSLP markers z23011 and z13695 using bulk segregant analysis. mob^m819 linked to tfap2a through RFLP analysis.
z13695	SSLP	24	2.75 cM	Holzschuh et al., 2003	Holzschuh et al. (2003, Development 130: 5741-5754) report mapping mob^m819 to LG24 between SSLP markers z23011 and z13695 using bulk segregant analysis. mob^m819 linked to tfap2a through RFLP analysis.

Genomic Feature ts213 is an allele of tfap2a

Marker	Type	Chr	Distance	Publication / Person	Comments
z23011	SSLP	24		Knight et al., 2003	Knight et al. (2003, Development 130:5755-5768) report mapping mob^ts213 between z23011 and z3399 on a meiotic map. This corresponds to the map position of tfap2a that also maps between z23011 and z3399.
z3399	SSLP	24		Knight et al., 2003	Knight et al. (2003, Development 130:5755-5768) report mapping mob^ts213 between z23011 and z3399 on a meiotic map. This corresponds to the map position of tfap2a that also maps between z23011 and z3399.

Genomic Feature m610 is an allele of tfap2a

Marker	Type	Chr	Distance	Publication / Person	Comments
z23011	SSLP	24	1.3 cM	Barrallo Gimeno et al., 2004

Genomic Feature ts213 is an allele of tfap2a

Chr 24

Knight et al., 2003

Knight et al. (2003, Development 130:5755-5768) report mapping mob^ts213 between ...

Genomic Feature nt30 is an allele of tfap2a