ZFIN ID: ZDB-GENE-040809-1

Mapping Details

Gene Name: ATM serine/threonine kinase
Symbol: atm
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 15 6,409,883 - 6,947,332 GRCz12tu
NCBI Map Viewer 15 6,409,883 - 6,947,332 GRCz12tu
Ensembl 15 6,514,964 - 6,615,555 GRCz11
NCBI Map Viewer 15 6,514,964 - 6,651,137 GRCz11
Vega 15 6,517,631 - 6,618,222 GRCv10
Mapped Clones containing atm
ZFOS-598C2 Chr: 15 Details
CH1073-121F8 Chr: 15 Details
CH1073-449D16 Chr: 15 Details
CH1073-349P20 Chr: 15 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
nya2 15 6,645,497 - 6,645,501 GRCz11 DIRECT Ajouaou et al., 2023
sa6364 15 6,843,781 GRCz12tu DIRECT Sealy et al., 2025
15 6,548,826 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,551,493 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,433,600 Zv9 DIRECT Busch-Nentwich et al., 2013
sa14977 15 6,908,925 GRCz12tu DIRECT Sealy et al., 2025
15 6,613,400 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,616,067 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,498,174 Zv9 DIRECT Busch-Nentwich et al., 2013
sa15974 15 6,853,140 GRCz12tu DIRECT Sealy et al., 2025
15 6,558,185 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,560,852 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,442,959 Zv9 DIRECT Busch-Nentwich et al., 2013
sa17959 15 6,815,872 GRCz12tu DIRECT Sealy et al., 2025
15 6,520,919 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,523,586 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,405,693 Zv9 DIRECT Busch-Nentwich et al., 2013
sa22587 15 6,820,495 GRCz12tu DIRECT Sealy et al., 2025
15 6,525,542 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,528,209 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,410,316 Zv9 DIRECT Busch-Nentwich et al., 2013
sa24975 15 6,866,367 GRCz12tu DIRECT Sealy et al., 2025
15 6,571,220 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,573,887 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,455,994 Zv9 DIRECT Busch-Nentwich et al., 2013
sa28405 15 6,941,447 GRCz12tu DIRECT Sealy et al., 2025
15 6,645,362 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,648,039 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,553,592 Zv9 DIRECT Busch-Nentwich et al., 2013
sa35807 15 6,875,880 GRCz12tu DIRECT Sealy et al., 2025
15 6,580,733 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,583,400 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,465,507 Zv9 DIRECT Busch-Nentwich et al., 2013
sa35808 15 6,882,198 GRCz12tu DIRECT Sealy et al., 2025
15 6,587,049 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,589,716 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,471,823 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42483 15 6,820,224 GRCz12tu DIRECT Sealy et al., 2025
15 6,525,271 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,527,938 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,410,045 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42484 15 6,848,438 GRCz12tu DIRECT Sealy et al., 2025
15 6,553,483 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,556,150 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,438,257 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42485 15 6,884,696 GRCz12tu DIRECT Sealy et al., 2025
15 6,589,547 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,592,214 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,474,321 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42486 15 6,906,313 GRCz12tu DIRECT Sealy et al., 2025
15 6,610,788 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 6,613,455 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 6,495,562 Zv9 DIRECT Busch-Nentwich et al., 2013
zf3863 15 6,612,768 - 6,612,769 GRCz11 DIRECT Chen et al., 2022
zf3884 15 6,612,768 - 6,612,769 GRCz11 DIRECT Ying et al., 2022
la019487Tg 15 6,468,447 - 6,468,457 Zv9 ZFIN_Zv9 BurgessLin
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
nya2 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa6364 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa14977 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa15974 15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa17959 15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa22587 15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa24975 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa28405 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa35807 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa35808 15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa42483 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa42484 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa42485 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa42486 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf3863 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
zf3884 15 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
15 1486.0 cR atm Goodfellow T51 (T51) Zhou, Yi Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z15442 SSLP 15 55.04 cR Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...
laynb GENE 15 115.03 cR Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...
sdhdb GENE 15 Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...
npat GENE 15 Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...
bco2b GENE 15 Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...
sik2b GENE 15 Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...
z22027 SSLP 15 Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...
z6312 SSLP 15 Auer et al., 2007 Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ...

OTHER MAPPING INFORMATION: No data available
Genomic Feature sa42484 is an allele of atm
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