ZFIN ID: ZDB-GENE-050522-61

Mapping Details

Gene Name:	serine palmitoyltransferase, long chain base subunit 1
Symbol:	sptlc1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	10	5,707,298 - 5,738,217	GRCz12tu
NCBI Map Viewer	10	5,707,298 - 5,738,217	GRCz12tu
Ensembl	10	5,234,327 - 5,265,160	GRCz11
NCBI Map Viewer	10	5,234,344 - 5,265,160	GRCz11
UCSC	10	-	GRCz11
Vega	10	5,234,023 - 5,264,856	GRCv10

Mapped Clones containing sptlc1
CH211-67C21	Chr: 10 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa12144	10	5,737,495	GRCz12tu	DIRECT		Sealy et al., 2025
	10	5,264,438	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	10	5,264,134	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	10	5,267,840	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa34823	10	5,713,061	GRCz12tu	DIRECT		Sealy et al., 2025
	10	5,240,107	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	10	5,239,803	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	10	5,243,509	Zv9	DIRECT		Busch-Nentwich et al., 2013
ug105a	10	5,234,378 - 5,234,387	GRCz11	DIRECT		Castanon et al., 2020
sa12144	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa34823	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
ug105a	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available

Markers Encoded by sptlc1
fp41c08 Chr: 10 Details

Genomic Feature sa34823 is an allele of sptlc1