ZFIN ID: ZDB-GENE-070501-6

Mapping Details

Gene Name:	collagen, type VI, alpha 1
Symbol:	col6a1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	11	36,285,778 - 36,355,009	GRCz12tu
NCBI Map Viewer	11	36,285,778 - 36,355,009	GRCz12tu
Ensembl	11	33,996,526 - 34,065,718	GRCz11
NCBI Map Viewer	11	33,996,529 - 34,065,708	GRCz11
Vega	11	33,733,724 - 33,802,916	GRCv10

Mapped Clones containing col6a1
DKEY-287I12	Chr: 11 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
ama605003	11	34,050,422 - 34,050,423	GRCz11	DIRECT		Radev et al., 2015
ia600	11	34,059,725 - 34,059,726	GRCz11	DIRECT		Tonelotto et al., 2022
sa949	11	36,349,042	GRCz12tu	DIRECT		Sealy et al., 2025
	11	34,059,741	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	33,796,939	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	34,896,002	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa21944	11	36,288,820	GRCz12tu	DIRECT		Sealy et al., 2025
	11	33,999,571	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	33,736,769	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	34,835,832	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa21945	11	36,337,947	GRCz12tu	DIRECT		Sealy et al., 2025
	11	34,048,646	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	33,785,844	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	34,884,907	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa31842	11	36,318,785	GRCz12tu	DIRECT		Sealy et al., 2025
	11	34,029,484	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	33,766,682	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	34,865,745	Zv9	DIRECT		Busch-Nentwich et al., 2013
ama605003	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
ia600	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa949	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa21944	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa21945	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa31842	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa21945 is an allele of col6a1