ZFIN ID: ZDB-GENE-070912-274

Mapping Details

Gene Name: collagen, type VIII, alpha 1a
Symbol: col8a1a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 9 31,765,216 - 31,777,256 GRCz12tu
NCBI Map Viewer 9 31,765,216 - 31,777,256 GRCz12tu
Ensembl 9 30,090,656 - 30,102,778 GRCz11
NCBI Map Viewer 9 30,090,739 - 30,102,779 GRCz11
UCSC 9 - GRCz11
Vega 9 30,279,910 - 30,292,032 GRCv10
Mapped Clones containing col8a1a
CH211-283E2 Chr: 9 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa6114 9 31,775,332 GRCz12tu DIRECT Sealy et al., 2025
9 30,100,855 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 30,290,109 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 31,134,163 Zv9 DIRECT Busch-Nentwich et al., 2013
sa13665 9 31,775,488 GRCz12tu DIRECT Sealy et al., 2025
9 30,101,011 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 30,290,265 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 31,134,319 Zv9 DIRECT Busch-Nentwich et al., 2013
sa34670 9 31,776,958 GRCz12tu DIRECT Sealy et al., 2025
9 30,102,481 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 30,291,735 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 31,135,789 Zv9 DIRECT Busch-Nentwich et al., 2013
m208 9 GRCz11 GENERAL_LOAD load data [singleton]
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
9 GRCz11 OTHER_MAPPING linkagesDirectMem1
9 GRCz11 OTHER_MAPPING linkagesDirectMem2
m531 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
pd1100 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa6114 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa13665 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa34670 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
vu41 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
vu105 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z559 SSLP 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...
z6430 SSLP 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...
z6845 SSLP 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...
m208 Feature 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...

OTHER MAPPING INFORMATION
Chr 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver (m208) to LG9  ...
Genomic Feature m208 is an allele of col8a1a
Marker Type Chr Distance Publication / Person Comments
col8a1a GENE 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...
z559 SSLP 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...
z6430 SSLP 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...
z6845 SSLP 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver  ...
Genomic Feature m208 is an allele of col8a1a
Chr 9 Gansner et al., 2008 Gansner, et al. (2008. Dev. Dyn. 237(12): 3715-3726.) reports mapping gulliver (m208) to LG9  ...
Genomic Feature vu105 is an allele of col8a1a
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