ZFIN ID: ZDB-GENE-050105-6

Mapping Details

Gene Name:	transient receptor potential cation channel, subfamily A, member 1a
Symbol:	trpa1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	2	33,075,861 - 33,094,835	GRCz12tu
NCBI Map Viewer	2	33,075,861 - 33,094,835	GRCz12tu
Ensembl	2	30,116,486 - 30,135,446	GRCz11
NCBI Map Viewer	2	30,116,486 - 30,135,446	GRCz11
UCSC	2	-	GRCz11
Vega	2	30,132,953 - 30,151,913	GRCv10

Mapped Clones containing trpa1a
DKEY-265A7	Chr: 2 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hu2163	2	33,091,510	GRCz12tu	DIRECT		Sealy et al., 2025
	2	30,132,125	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	30,148,592	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	29,846,957	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa8995	2	33,087,559	GRCz12tu	DIRECT		Sealy et al., 2025
	2	30,128,174	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	30,144,641	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	29,843,006	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa19784	2	33,080,970	GRCz12tu	DIRECT		Sealy et al., 2025
	2	30,121,585	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	30,138,052	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	29,836,417	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa30822	2	33,085,440	GRCz12tu	DIRECT		Sealy et al., 2025
	2	30,126,055	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	30,142,522	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	29,840,887	Zv9	DIRECT		Busch-Nentwich et al., 2013
hu2163	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa8995	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa19784	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa30822	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
2	79.1 cM	trpa1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa19784 is an allele of trpa1a