ZFIN ID: ZDB-GENE-030131-9877

ZFIN ID: ZDB-GENE-030131-9877

Mapping Details

Gene Name:	LLGL scribble cell polarity complex component 2
Symbol:	llgl2

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	12	35,649,029 - 35,699,673	GRCz12tu
NCBI Map Viewer	12	35,649,029 - 35,699,673	GRCz12tu
Ensembl	12	33,738,361 - 33,789,006	GRCz11
NCBI Map Viewer	12	33,738,361 - 33,788,952	GRCz11
UCSC	12	-	GRCz11
Vega	12	33,637,378 - 33,688,023	GRCv10

Mapped Clones containing llgl2
CH73-77C22	Chr: 12 Details
CH1073-342O4	Chr: 12 Details
DKEYP-67E6	Chr: 12 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa31887	12	35,669,045	GRCz12tu	DIRECT		Sealy et al., 2025
	12	33,758,324	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	12	33,657,341	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	12	35,253,232	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa38900	12	35,668,955	GRCz12tu	DIRECT		Sealy et al., 2025
	12	33,758,234	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	12	33,657,251	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	12	35,253,142	Zv9	DIRECT		Busch-Nentwich et al., 2013
to6	12	33,758,245	GRCz11	DIRECT		Sonawane et al., 2005
la012203Tg	12	35,269,914 - 35,269,924	Zv9	ZFIN_Zv9	BurgessLin
la018226Tg	12	35,249,235 - 35,249,245	Zv9	ZFIN_Zv9	BurgessLin
to6	12		GRCz11	GENERAL_LOAD	load data [singleton]
la012203Tg	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
la018226Tg	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa31887	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa38900	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
to6	12		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	12		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

Markers Encoded by llgl2
fc06g08 Chr: 12 Details
MGC:55895 Chr: 12 Details

Genomic Feature to6 is an allele of llgl2

Marker	Type	Chr	Distance	Publication / Person	Comments
z8450	SSLP	12		Sonawane et al., 2005	penner was located 49.1 cM from the top of chromosome 12, between z3801 (21/1872 meioses) and z8450 (12/1872 meioses). pen was located between snp markers zC166F20.ya (3/1872 meioses) and zC209I1.za (2/1872 meioses), very close to zC11oC15.ya (0/1872 meioses).
z3801	SSLP	12		Sonawane et al., 2005	penner was located 49.1 cM from the top of chromosome 12, between z3801 (21/1872 meioses) and z8450 (12/1872 meioses). pen was located between snp markers zC166F20.ya (3/1872 meioses) and zC209I1.za (2/1872 meioses), very close to zC11oC15.ya (0/1872 meioses).

Genomic Feature to6 is an allele of llgl2

Chr 12

penner was located 49.1 cM from the top of chromosome 12, between z3801 (21/1872 meioses) ...

Genomic Feature la012203Tg is an allele of llgl2