ZFIN ID: ZDB-GENE-011119-1

Mapping Details

Gene Name: glypican 4
Symbol: gpc4
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 14 35,600,751 - 35,660,045 GRCz12tu
NCBI Map Viewer 14 35,600,751 - 35,660,045 GRCz12tu
Ensembl 14 31,090,151 - 31,151,148 GRCz11
NCBI Map Viewer 14 31,092,327 - 31,151,148 GRCz11
UCSC 14 - GRCz11
Vega 14 30,749,837 - 30,810,834 GRCv10
Mapped Clones containing gpc4
CH211-191O15 Chr: 14 Details
DKEY-57B1 Chr: 14 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
hi1688Tg 14 31,102,554 - 31,102,555 GRCz11 DIRECT ZFIN Curated Data
hi1934Tg 14 31,151,233 - 31,151,234 GRCz11 DIRECT ZFIN Curated Data
sa9771 14 35,659,397 GRCz12tu DIRECT Sealy et al., 2025
14 31,150,976 GRCz11 DIRECT Busch-Nentwich et al., 2013
14 30,810,662 GRCz10 DIRECT Busch-Nentwich et al., 2013
14 32,020,855 Zv9 DIRECT Busch-Nentwich et al., 2013
sa11933 14 35,604,375 GRCz12tu DIRECT Sealy et al., 2025
14 31,095,955 GRCz11 DIRECT Busch-Nentwich et al., 2013
14 30,755,641 GRCz10 DIRECT Busch-Nentwich et al., 2013
14 31,965,834 Zv9 DIRECT Busch-Nentwich et al., 2013
sa22505 14 35,659,428 GRCz12tu DIRECT Sealy et al., 2025
14 31,151,007 GRCz11 DIRECT Busch-Nentwich et al., 2013
14 30,810,693 GRCz10 DIRECT Busch-Nentwich et al., 2013
14 32,020,886 Zv9 DIRECT Busch-Nentwich et al., 2013
la012557Tg 14 32,012,478 - 32,012,488 Zv9 ZFIN_Zv9 BurgessLin
b404 14 GRCz11 GENERAL_LOAD load data [singleton]
m119 14 GRCz11 GENERAL_LOAD load data [singleton]
b404 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
b639 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
fr6 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
gpc4_unspecified 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
hi1688Tg 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
hi1934Tg 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la012557Tg 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
m119 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING linkagesDirectMem1
14 GRCz11 OTHER_MAPPING linkagesDirectMem2
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
m818 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa9771 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa11933 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa22505 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
u34.8 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
vu4 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
vu5 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
vu8 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
vu68 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
vu69 Feature 14 3.5 cM Mendelsohn et al., 2006
z8801 SSLP 14 0.1 cM Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report using a panel of 1150 meioses to map kny to LG14 near z3091, z8801, and z20663. A chromosome walk using PACs and YACs physically maps these loci.
z3091 SSLP 14 0.4 cM Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report using a panel of 1150 meioses to map kny to LG14 near z3091, z8801, and z20663. A chromosome walk using PACs and YACs physically maps these loci.
z20663 SSLP 14 0.3 cM Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report using a panel of 1150 meioses to map kny to LG14 near z3091, z8801, and z20663. A chromosome walk using PACs and YACs physically maps these loci.

OTHER MAPPING INFORMATION
Chr 14 Golling et al., 2002 Adam Amsterdam (pers. comm.) reports that kny is mapped to LG14 on the T51 mapping panel.
Chr 14 Topczewski et al., 2001
Markers Encoded by gpc4
fe05f10 Chr: 14 Details
Genomic Feature m119 is an allele of gpc4
Marker Type Chr Distance Publication / Person Comments
z8801 SSLP 14 0.1 cM Topczewski et al., 2001
z8801 SSLP 14 Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report using a panel of 48 meioses to map knym119 close to z3091, z8801, and z20663.
z20663 SSLP 14 Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report using a panel of 48 meioses to map knym119 close to z3091, z8801, and z20663.
z3091 SSLP 14 Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report using a panel of 48 meioses to map knym119 close to z3091, z8801, and z20663.
Genomic Feature m119 is an allele of gpc4
Chr 14 Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report using a panel of 48 meioses to map  ...
Genomic Feature b404 is an allele of gpc4
Chr 14 Topczewski et al., 2001 Topczewski, et al. (2001. Dev Cell 1:251-264.) report mapping knyb404 to LG14  ...
Genomic Feature u34.8 is an allele of gpc4
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