ZFIN ID: ZDB-GENE-020416-5

Mapping Details

Gene Name: T-box transcription factor 6
Symbol: tbx6
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 12 4,397,313 - 4,407,839 GRCz12tu
NCBI Map Viewer 12 4,397,313 - 4,407,839 GRCz12tu
Ensembl 12 3,912,544 - 3,923,070 GRCz11
NCBI Map Viewer 12 3,912,544 - 3,923,070 GRCz11
UCSC 12 - GRCz11
Vega 12 3,875,779 - 3,886,305 GRCv10
Mapped Clones containing tbx6
CH211-136M16 Chr: 12 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa17875 12 4,406,194 GRCz12tu DIRECT Sealy et al., 2025
12 3,921,425 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 3,884,660 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 4,601,938 Zv9 DIRECT Busch-Nentwich et al., 2013
sa38869 12 4,405,869 GRCz12tu DIRECT Sealy et al., 2025
12 3,921,100 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 3,884,335 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 4,601,613 Zv9 DIRECT Busch-Nentwich et al., 2013
sa41936 12 4,406,458 GRCz12tu DIRECT Sealy et al., 2025
12 3,921,689 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 3,884,924 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 4,602,202 Zv9 DIRECT Busch-Nentwich et al., 2013
sud102 12 3,912,472 - 3,912,499 GRCz11 DIRECT Ban et al., 2019
sud103 12 3,912,494 - 3,912,500 GRCz11 DIRECT Ban et al., 2019
sud104 12 3,912,464 - 3,912,483 GRCz11 DIRECT Ban et al., 2019
sud105 12 3,912,483 - 3,912,486 GRCz11 DIRECT Ban et al., 2019
te314a 12 3,921,103 GRCz11 DIRECT ZFIN Curated Data
vp43rc1 12 3,917,608 - 3,917,682 GRCz11 DIRECT Aman et al., 2021
m774 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa17875 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa38869 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa41936 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sud102 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sud103 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sud104 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sud105 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tbx6_unspecified 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
te314a 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
ti1 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
vp43rc1 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
y55 12 GRCz11 OTHER_MAPPING linkagesDirectMem2
12 GRCz11 OTHER_MAPPING linkagesDirectMem1
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
y66 12 GRCz11 OTHER_MAPPING linkagesDirectMem2
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING linkagesDirectMem1

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z21911 SSLP 12 Nikaido et al., 2002 Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321 and z1473, near z21911 on the T51 and LN54 mapping panels.
z1473 SSLP 12 Nikaido et al., 2002 Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321 and z1473, near z21911 on the T51 and LN54 mapping panels.
z17321 SSLP 12 Nikaido et al., 2002 Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321 and z1473, near z21911 on the T51 and LN54 mapping panels.

OTHER MAPPING INFORMATION
Chr 12 Nikaido et al., 2002 Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321  ...
Genomic Feature y55 is an allele of tbx6
Marker Type Chr Distance Publication / Person Comments
z21911 SSLP 12 2.0 cM Shaw et al., 2006
y66 Feature 12 Shaw et al., 2006
Genomic Feature y66 is an allele of tbx6
Marker Type Chr Distance Publication / Person Comments
z21911 SSLP 12 2.0 cM Shaw et al., 2006
y55 Feature 12 Shaw et al., 2006
Genomic Feature y55 is an allele of tbx6
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