Genomic Feature

sr6

ID

ZDB-ALT-230504-2

Name

sr6

Synonyms

None

Affected Genomic Region

chd7 (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

Lab of Origin

Lien Lab

Current Source

Other Pages

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 2: 21782674 - 21782679 (GRCz11) (1) Details
Nucleotide change: GTCCAT/-
Variant Notes: None

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 6 bp deleted in Exon 12 (1)
Transcript Consequence: Inframe Deletion (1)
Protein Consequence: Amino Acid Deletion : 2 AA missing from position 1082 to 1083 (1)

Sequences

Flanking Sequence: GATATTTCTAGGATTTTACCAGGACGGTGTAAATGTCACATTCAGTAAATACTTAAGTGTAAGCTTGACCTAGGTTATAGCAGATTATTTTCTGGCACTAACCATGTCCATCATCTTTAAGCCCTCAAGCAGCTTGCAGTTCCTATTCTTGAGCCTATGAGCCTCATCAATAATCACGCAGCGCCATGGCACATTTCGTAGCTCAGGGCAGTCTGTCAGGATCATCTCAAATGTGGTGATGACGGCATGGAATTTGTAGGCTCCCTTTATTATACGTCCCTGCAGGAAGAGAGAAATTTCTTATGATAAACAACCCTACGAATATAGTCCAGCAGAAATATTGTGAAACATTATCTTCTACAACTCAAATGAGAAAATAAATCAATGCATATAAAATGACAAAGGAATTATTTACCTGTGTGTCCCTGTAGTACATCTCGTAGGCCTGAATGGTCTTTCGGCTGGCCTGGCTACCATGATAGACCACTACGTTTAGCTCC
GTCCAT/- GTCCTGAACTCCCTCTCCCAGTTGGGAATAGTGGAAAGAGGAGCAATCACAAGAAAAGGACCGTGGATTCCCTTCAGGTATATCTCATAGAGGAATGTGATGGATTGGATTGTTTTACCAAGTCCCATTTCATCAGCTAAAATGCAGTTTCGTCTGAGGAAAAAAAAAAAAAAAAAAAAACAACAACTCAAATTCAAAGCATCTTAACACTTAAATAGTATCAAAAACCATGGTTTAGCACACATATGTGCAAGCGGTGCGGCTGGACAGCTGGGTAATTGCATACATACGTGTTGTACCAGTTGAAGAGCAGCCAGTTGACTCCCTCCAGCTGGTATTCCCTGAGCGCATTGGCGTTTTTATATTCTCTGGAACTCTCGGATTTCTGCCAGTCGCTGGTGGGAGGTCGCTCCTGTTTCAAATAAAACAATTCCCGTTAGTGGTTTCTGTGCAACCGCAAGAACGTGGCCCTCTCCCCTCACTAGCTCAGCACTCCAAAG
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations