Genomic Feature
fb106
- ID
- ZDB-ALT-221026-3
- Name
- fb106
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Langenau Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| This line contains a large deletion encompassing exon 2. | Zhang et al., 2021 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 25: 9010770 - 9014172 (GRCz11) (1) Details
- Nucleotide change
- CTCAGCATATGTAGTCAAGGGCCTATGTTTGTTTTTAAGCACCCGCTTCGGATGTTATCACTTGATTAAATGAGCATTATCAGTGGTTATCACCTAATAGATATGGGCCAGTAGGGGCCTTCTGCGCCTACTAGTAGGCTGAGAATGCTGTTATCATTCATCCACATGGTTAATCAGCTATACTAATAGAGAAGACTCCAGATCCAGATCTGCTTTTACATTACTATGATGGATGGGTTTAGGGTTGGGGTAGCCGTTAATAAAAAGCTACTAATGGGACATTTAATAGATAATATAAATAATTCTTGTTAACTTTCAGCTGCAGCCGTAAGTGATCTATAGCTGATTAACCATGTGGATGCATGATAACAGCCTTCTGAACCTACAAGTAGGCCCAGAAGGCCCCTACTGGCCCACATCTATAGGCTGATAACCACTCATAATGCCCATTCAATACAGTGATAACATTTGAAACGGCTGTTTTAAAGTACTTTCCAGGCCTTGAATCCATAAGTCTGAAATTCAAATACTTTCAAGTATTTTCAACAAGAACCATGTGAAGAGAAAAGAAGAACAAATCAGTCAAAAAGTCTTCGCAGAAAGGTCTTCTTAGCTGGGGTCATCTTCAGTGAGACAGGAGCCTTGCGGTGGGTCATCTTCATTGGGACTCTCTTCACTGGTAACATCTGCTTCGGAGGAGTCATCTCCTGTTTGGGCAGGCCACCATGATCCAAGCAGAAGTACTTGCTGTTATCTTGGGAGAGTTGGAGCAGAAGGCTTTCAGGGAGCTCCATGCATTGGGCATGGACCCAGTGTCCACCTTCACCCCTGGAGCAGAAGATCATGGCAGGTCGGGTGAGCTCAGTAGAATAGTAGGGCTCCCAGATATTGGGGTCCACCTGGCAGGACAGGCAGCACTTGATCCAGTAGCCTGTCTGAGATTCATCCTCCTCATCTTCCTCGTTATAGGTGTCGCCCTCTACATCGCTGCTATACTCCAGCTCGTGAGGCTCTCGGCCAAAGTACAGCTCCTCAGAGTCTTCCAAAGGTGCAGAGTCCTCGAAATCAGTGGACTCCTGGCTGCCTCCCTGTGCCGTAGCTTCTCCATCTTGTTCCTTCTGGAAGCTCACTTGGTAGAAATGGTAGGCTTCTGGCGGGGTCGGGTTTCCTTCTGAAGGAATTGCAACTAGAGCAGTTCCTTTGCCCAAGCTGCCACCAAACCAAGTACGACTGTGGCTGATCTCGCTGGTCCACTGTGGAGGTTCGCGAGACTCCATATGGACTCCCACATCATCCAGGCCAACGTAGGTGCACTCCATGCGCTTCTGAGTCTCAGATTGGTATCCGCCGAAAATGATGTACTCATGATAGCCAATAGGGGAGGCTATGGCACTGGTGATTGTGAGACCTTCGTGAAGAATGGTGCAGGTAAGGACAGGGCTTCCAAGGAGAAGCTCCACATGGAGACGGATCAAACGAGAGGGTCGGCAGTCGGAGCTGAGGATGTGACCACCTAGGAAGTAGACACAATCCTGTCTAGCTAGGGCTACATGAAATGACTGGCCATCTGTTAGCTCGGGGAGGGTGTGAGCCGTACAGCAGCCAAACTCTAGGTCAATAAGGTAGACTTGAGGCGGACAGTCCACTACACTGTTCCAGTTCTGCGTGGTCCTTTCGGTTGGGGGCATATAAGATCTGCCACCAAACAGAACGCATGCAGTTTTCCCTCGGCTATTTATCACACTGAGGGTATGGCCATATCGAGCACTAGGGACATCTCCAACTAGCTCTTTTTCTTCACAACGCAATGTGACTTTACGATTGCAGCCTCTGCTGTCTACGCTCAACATGTAGAGACTGGAGGACAGCTCGTTGTTGGGTGTTCGGCCGCCATGAATGAGGTAACATTCAGGTTTGCCGTCTTGAGCCTCGAAGTGAGCTATCGCAGGACATCGGAGGGGAGGGAGATAACTGGAGTTGTTGGAAAATGAAATGGCACGCAGTTTAAGTTCTCCTTTTTTAATGCGTACACCAAATATCCCAGTTGGACATGAGCGTTTTGGCCAGCCCTTTTGTCCAAAGAGGTAAACATCACCCTCCAGGTCTAGTAAGGAGAAACCTGGTTGCACAAGGCTGCCACAATTCACTGCTGTTAGAGGCTGTAAGGACATCTTTTTGAAGGTAGCTGTGTAAAAAAAATAAAAAAAAACATTAATTTATAGTCATTTAATTGTACAATGTTAATTTTATTACCTCTTATAAAAACCAACCATGGCTTTACCACAGATAATACTTAAACTTAAAGATAACAATGGCAACCATAGTGTTACACTACACTAGACATAGTTTAACCATAGTATTTGTAGTATAACTGTGATGTTTAAATGATTATCATTGTATCAAAGAATGCTAGTGCTTCAAATTAGCATAAGAGTAAGCGAAGTGTGTAGTTAGGTCTTATTTTATTATTCAAAGTAAGAAAAAAACGCGGAACCATATCTTTCTTTCGCTGTTTCCCCGAAAACAGAAACATTTTCCACAGGAAATTGTAGTTTTCCTAACTCTAGTTTCCCGTTGAGACGCACATTAAGCATACAATATAAGGACTACAGTACCCAGCATTCAGTGCGAGAGCGGCGTCTGCGTTTAAACGGTAGGCTTTATCTGATGTACTTTTCTATGTGCTCCAAAAGCTACTATTCTCGTATTTTCTTCAACATTTTTCTGCCGTTTCTACATCTGATATGTTTTAGATTCGCCTGAAGGTAATCAAATACGCAAGAGAAGCATTAACAAACAAATTAGCAAGCACTAATAATAACTGTCAACACGAGTAACTGAGCACTACATTAACACAGTAACGTTATATGTAAACCACGTTACCTACTGTAGCCTATATTTTAATATATATCATTTTACATTATGCAAATCGTATTTCCATCAGTTCCTCTACTCTATATGTCACTTAAAACACGTACGCTTCCAAATATTACATATCTAGTCTTACAATAGTCGTCCTAGTAATGTAACGTTACTTCTTACCTCTTGGTCAGTGTACTCCGAAATCTGAGAGCTGTTTGGTGCTGGAAATTTTTATTTTAGATATTAACGCGAATTGTTTAGTGAGTGAGCCAGAGGTTGAGTGTTTGTGAAGGTTGACTGGCTCCTCTTGAGGTTTACTGTTTGCAACTGCTGCTCACAACAGGTGTTTGAGCACAATCACACGAGTTTGAATGAAAACATGCACAAACTCACTGCATCATTGGCTGTTTATTAATATGGAGTTCTGGTTTTGTGCTGCTGATCAGCAATACTCATAGATATTATATTTTTCCGTGCAATTTTAGTCATTATGAATGTTTCCAGGTCTTTCCAAATGGGGACATAACCCAACCACCCCCCG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 3403 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TATCATAACATTAATTATTAATTTGTGGCTCTTTTTGGATTCTTGGAAGCTGTAAAAATTAAAATAAATATACATTGGGACCATTGTTTTTGTTTACATCCCTCAATGTGGTCTATATATTCATCATAAGCATAAAACAGAAGGTTTAATGATAGTATATTTTAATGATTTCTCTTTATTCAAGCACAAAAAACATGCCCCTCCCCTTCACATTTTAAAATGACAACAAATTATCTTAGAAATAATACACAAACATTGTAAAAATAAATCCATATAGCCAATTACTACAGCAATACTTAACACATTTATGATGTTTCTAAATGGAAATTACACATCCCCAAGTTTCTGTTAGTATAAATCCCCATTAAAATGTTAAAAATGAACAACAATATAAACAAAGCTGATGTCATGATGAACACTGGGTTCCTATAATTTCATGGACACCAGATTCAAGCACTTTCAATATTAATTTTCAAATCAAGCACCTTTGTTATTCATAC
CTCAGCATATGTAGTCAAGGGCCTATGTTTGTTTTTAAGCACCCGCTTCGGATGTTATCACTTGATTAAATGAGCATTATCAGTGGTTATCACCTAATAGATATGGGCCAGTAGGGGCCTTCTGCGCCTACTAGTAGGCTGAGAATGCTGTTATCATTCATCCACATGGTTAATCAGCTATACTAATAGAGAAGACTCCAGATCCAGATCTGCTTTTACATTACTATGATGGATGGGTTTAGGGTTGGGGTAGCCGTTAATAAAAAGCTACTAATGGGACATTTAATAGATAATATAAATAATTCTTGTTAACTTTCAGCTGCAGCCGTAAGTGATCTATAGCTGATTAACCATGTGGATGCATGATAACAGCCTTCTGAACCTACAAGTAGGCCCAGAAGGCCCCTACTGGCCCACATCTATAGGCTGATAACCACTCATAATGCCCATTCAATACAGTGATAACATTTGAAACGGCTGTTTTAAAGTACTTTCCAGGCCTTGAATCCATAAGTCTGAAATTCAAATACTTTCAAGTATTTTCAACAAGAACCATGTGAAGAGAAAAGAAGAACAAATCAGTCAAAAAGTCTTCGCAGAAAGGTCTTCTTAGCTGGGGTCATCTTCAGTGAGACAGGAGCCTTGCGGTGGGTCATCTTCATTGGGACTCTCTTCACTGGTAACATCTGCTTCGGAGGAGTCATCTCCTGTTTGGGCAGGCCACCATGATCCAAGCAGAAGTACTTGCTGTTATCTTGGGAGAGTTGGAGCAGAAGGCTTTCAGGGAGCTCCATGCATTGGGCATGGACCCAGTGTCCACCTTCACCCCTGGAGCAGAAGATCATGGCAGGTCGGGTGAGCTCAGTAGAATAGTAGGGCTCCCAGATATTGGGGTCCACCTGGCAGGACAGGCAGCACTTGATCCAGTAGCCTGTCTGAGATTCATCCTCCTCATCTTCCTCGTTATAGGTGTCGCCCTCTACATCGCTGCTATACTCCAGCTCGTGAGGCTCTCGGCCAAAGTACAGCTCCTCAGAGTCTTCCAAAGGTGCAGAGTCCTCGAAATCAGTGGACTCCTGGCTGCCTCCCTGTGCCGTAGCTTCTCCATCTTGTTCCTTCTGGAAGCTCACTTGGTAGAAATGGTAGGCTTCTGGCGGGGTCGGGTTTCCTTCTGAAGGAATTGCAACTAGAGCAGTTCCTTTGCCCAAGCTGCCACCAAACCAAGTACGACTGTGGCTGATCTCGCTGGTCCACTGTGGAGGTTCGCGAGACTCCATATGGACTCCCACATCATCCAGGCCAACGTAGGTGCACTCCATGCGCTTCTGAGTCTCAGATTGGTATCCGCCGAAAATGATGTACTCATGATAGCCAATAGGGGAGGCTATGGCACTGGTGATTGTGAGACCTTCGTGAAGAATGGTGCAGGTAAGGACAGGGCTTCCAAGGAGAAGCTCCACATGGAGACGGATCAAACGAGAGGGTCGGCAGTCGGAGCTGAGGATGTGACCACCTAGGAAGTAGACACAATCCTGTCTAGCTAGGGCTACATGAAATGACTGGCCATCTGTTAGCTCGGGGAGGGTGTGAGCCGTACAGCAGCCAAACTCTAGGTCAATAAGGTAGACTTGAGGCGGACAGTCCACTACACTGTTCCAGTTCTGCGTGGTCCTTTCGGTTGGGGGCATATAAGATCTGCCACCAAACAGAACGCATGCAGTTTTCCCTCGGCTATTTATCACACTGAGGGTATGGCCATATCGAGCACTAGGGACATCTCCAACTAGCTCTTTTTCTTCACAACGCAATGTGACTTTACGATTGCAGCCTCTGCTGTCTACGCTCAACATGTAGAGACTGGAGGACAGCTCGTTGTTGGGTGTTCGGCCGCCATGAATGAGGTAACATTCAGGTTTGCCGTCTTGAGCCTCGAAGTGAGCTATCGCAGGACATCGGAGGGGAGGGAGATAACTGGAGTTGTTGGAAAATGAAATGGCACGCAGTTTAAGTTCTCCTTTTTTAATGCGTACACCAAATATCCCAGTTGGACATGAGCGTTTTGGCCAGCCCTTTTGTCCAAAGAGGTAAACATCACCCTCCAGGTCTAGTAAGGAGAAACCTGGTTGCACAAGGCTGCCACAATTCACTGCTGTTAGAGGCTGTAAGGACATCTTTTTGAAGGTAGCTGTGTAAAAAAAATAAAAAAAAACATTAATTTATAGTCATTTAATTGTACAATGTTAATTTTATTACCTCTTATAAAAACCAACCATGGCTTTACCACAGATAATACTTAAACTTAAAGATAACAATGGCAACCATAGTGTTACACTACACTAGACATAGTTTAACCATAGTATTTGTAGTATAACTGTGATGTTTAAATGATTATCATTGTATCAAAGAATGCTAGTGCTTCAAATTAGCATAAGAGTAAGCGAAGTGTGTAGTTAGGTCTTATTTTATTATTCAAAGTAAGAAAAAAACGCGGAACCATATCTTTCTTTCGCTGTTTCCCCGAAAACAGAAACATTTTCCACAGGAAATTGTAGTTTTCCTAACTCTAGTTTCCCGTTGAGACGCACATTAAGCATACAATATAAGGACTACAGTACCCAGCATTCAGTGCGAGAGCGGCGTCTGCGTTTAAACGGTAGGCTTTATCTGATGTACTTTTCTATGTGCTCCAAAAGCTACTATTCTCGTATTTTCTTCAACATTTTTCTGCCGTTTCTACATCTGATATGTTTTAGATTCGCCTGAAGGTAATCAAATACGCAAGAGAAGCATTAACAAACAAATTAGCAAGCACTAATAATAACTGTCAACACGAGTAACTGAGCACTACATTAACACAGTAACGTTATATGTAAACCACGTTACCTACTGTAGCCTATATTTTAATATATATCATTTTACATTATGCAAATCGTATTTCCATCAGTTCCTCTACTCTATATGTCACTTAAAACACGTACGCTTCCAAATATTACATATCTAGTCTTACAATAGTCGTCCTAGTAATGTAACGTTACTTCTTACCTCTTGGTCAGTGTACTCCGAAATCTGAGAGCTGTTTGGTGCTGGAAATTTTTATTTTAGATATTAACGCGAATTGTTTAGTGAGTGAGCCAGAGGTTGAGTGTTTGTGAAGGTTGACTGGCTCCTCTTGAGGTTTACTGTTTGCAACTGCTGCTCACAACAGGTGTTTGAGCACAATCACACGAGTTTGAATGAAAACATGCACAAACTCACTGCATCATTGGCTGTTTATTAATATGGAGTTCTGGTTTTGTGCTGCTGATCAGCAATACTCATAGATATTATATTTTTCCGTGCAATTTTAGTCATTATGAATGTTTCCAGGTCTTTCCAAATGGGGACATAACCCAACCACCCCCCG/- CGCTTGATACGGTTCTGTATATGCATATATTCACAGTAATACTTTTGTATAGTAACCAATAGCATAGGTTAATATACAAA ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None