Genomic Feature

zf3406

ID
ZDB-ALT-220307-17
Name
zf3406
Synonyms
  • cwr2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
McDermott Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 25636191 - 25636195 (GRCz11) (1) Details
Nucleotide change
TCCTC/-
Variant Notes
−5 bp at c.799–703 (−GAGGA)
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 7 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGGTGGTGGAGGCAAACTTGTTGTCGGCTGTCTCTGGGTTTCCTATAAGGTAATCCCAGCTAGTGAACAGCTTCCAGCAAAAGGTGAAGTTACCTTCATCTCCTCCATCTCCTCCTTCATTGGCGTTTCTGGCCATTCTAAAATATGCAGATGATTAGGAAGTAAATTCTGCACTCTCAGCAAGTAAAGTAAACCCCCTTGCAAGTTTACATAAAGCTCTGATCAGAAAACTCACGTTCTGATAACCACCATTAGACTATAGCCAAATATCCCAACACCAACCAGAAGGTATGACAGAGGTAACCGGAACTGCAGGAATCCAATAGTTCGTTGGTTGTTGTAGAAACCATAAAACAGAATGGAGTACTTGCAATAACCCTGTAAAAAATGTCAAAGGTATAATGAGGGGAAACTTACAGCTTGTTATACAAAGAATCTGCTAGTAAAAAACTCTTACTCCAAACTCAAATAGCACAGAGAAGTCCATGGCCGAATCCTGC
TCCTC/- TCTGGGGACTGTTTTTCTGGGAATAGAGCCATAAGGGATGCCCATTAATAACTACAAAGAAAACAACACAGATTGGGTTAACATTACAATACACATAATGCACACAACACAACATACATTCCCATTCTCTATAAACAAATATTTTGATAACAGTATCACATCTCACCTCTGGAATAACAACAAGTCCAAACATGAAGCCGAAGAGAACAAGGTTTAGTCCATACATCCATCTCAAGAAAATAAAATAGGAGGCAACAGATGATCCAAAATGGCCTACAAGAAACAGATGACACTGATGAGAAAATAATATAAAATACAGAAACATCAGGGGGGAAACACAGAGATGAACAGACTTTCTACTTCTTTTATTCGACTCTCCCAGGGAATGCAAGCCGTCTTGAAGTTTTCAAAGTCTCTATTGAATTTGATTAATTTCTGAGAAGCAAAGACAACACAAATGTTCAGTTATTGCCGTTAGGAAGAAACTTAAACAGTGAACA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations