Genomic Feature

ihb580

ID
ZDB-ALT-220209-6
Name
ihb580
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
Lab of Origin
Yonghua Sun Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 7993933 - 7993941 (GRCz11) (1) Details
Nucleotide change
CAGCGTG/-
Variant Notes
Between 181 bp and 187bp of the wild-type bloc1s5 coding sequence, CACGCTG is  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTCTACTGTGAACAAAAAGACAAAAGTCAATTTTTTCCCAGTATTTTCTGTTTTTTTTTGGCAGTATTTCCATCGTACACCCGCACACATTTTGATTTAAATACACTTAACATTCTCAAGCAATTGCGTGGAACATGTGCAAATGTGCTAATTAGCATGGACCGCTGTATAATTTCAGCATCATTCCACAATTAATTAGCAAAACTACAGAGGTGGCAAAAATGATAAAAACACTTGCCATATTTAAGAGTTGTTTTTAATTGCACATTAAAATATTCATAAAATGAATTATTAATGAAGTATTAACTGTAATCTTTTTAAAAGCACAATCTTAACATATTATCTGTATATCCATTAAATAGTTCCATCTTTTTTTAAATACTAAAACGCAGTTTTTAAGTACCTCTTAATTTTCTTTCACTTCATCACGCCATTTATTCTAAATAATGTGACTTACGTCTTGTGAGAGCGTCACACAGTTTCTCGTGCATACTCTCTGT
CAGCGTG/- CAAATCATGCTCATTGGTGTCTGACGTCATCTTATTCAGATTTTCAAGCAAGCGGCATTCTCTGAAAGCACGTTTCTCCTGGGGAATATTAACAGAGAAAATTAATTAGTGCAGTAAATTTGGTCCTTGTCAGAAGGTCACAGGTCAAAAAATCTTTGACTCAAAGGATGATGTGAAAATAGTGTCTGTACATCATTACGGTATGTCAATGAACATATTTATACGACAAAGCTGTATAGGATCATTTCAAATATTTTTAATTGCTTTATTTCAATTGTACATGTCTTAGGCAAAAAAGTCTTAACAAATTATTTCTTAAACACTAAATCAGTATTTCAGAAATATTTATGAGGGATTTTGTGTTATACTGAGTACTGAAGTAATGCAATCGCAGGAATAAATCATATTTATCATATTTAAATTAAAAGCTTTTTTTATACAATGTTATAACATTGACAGTATTCCTCTTTTACTGCGTTTCTATCAAATAATGAAAGTCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations