Genomic Feature
sh515
- ID
- ZDB-ALT-201027-1
- Name
- sh515
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one insertion (1)
- Protocol
- embryos treated with
- Lab of Origin
- van Eeden Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 15: 31917107 - 31917108 (GRCz11) (1) Details
- Nucleotide change
- -/AGGTAAGAATATTTTTCTATTAAGTTATCGAACAAACATTGTGTGTGCAAGTCCTTGAACAGGAATTTTATTTCACTTTTGAC
- Variant Notes
-
83 bp insertion line.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 83 bp inserted in Exon 10 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CAACACCTCAGCTTTGCGGAAAATCAAATCTAAAGAGAGGATCAGGAAGAGGATAACCAATTCCTCAGAGGATGTCAAATCAGTTTTTCTAACTTCAGAGCCAGAACAGAAATTAAAGGCTGATACTGAAACAAAAAGCCCCAGCAAAAATGACGATTCCATTGAATGGACCCCACTAAGTTTATCAGAGACCATACTGACCGAAGGTTGTTCAAGTACTTCTTTGGTAGACAATAACAACACGGTGGCACCCAGTGAAACTAACGATGGTGCTATTTTCAAATTCACTTCAGAAAGTAGCCAGACTTGTCCACAGAGTGTTAGACTCGAGTCTTCCCCTGAAGGAACTCAGTGTCAGAAGATTTTGTTGGACAAGTCGTCTGCTTTCATGCTTAACAAAAAGCCCAGGAAATTTGTGTATCAAGTGTCAAGTTCAGAAATGTCAACCACTTTAACTGGAAGCAAAGCAGATCTGCCAAAATGTTTGGACCAAACACTTAA
-/AGGTAAGAATATTTTTCTATTAAGTTATCGAACAAACATTGTGTGTGCAAGTCCTTGAACAGGAATTTTATTTCACTTTTGAC AGGTAAGAATATTTTTCTATTAAGTTATCGAACAAACATTGTGTGTGCAAGTCCTTGAACAGGAATTTTATTTCACTTTTGACAGAGGGTCCTTCGGTGGAGGAGCTATCTGTGTGCCTTAATAAATCCAGTTTCACTAATGAAAACCCAATTGGAGATCAAACACAGCCACAAGCTGTTGAACAGTTATCTTCAGAACATCTTGACCATGGCTTGGATATGACACAGCTTTCCAAAGCGTTTGCAGAGGAATTCACACAAGAAATAATGGCCGGAGGGCTGCTTGACATGCCGGTACAGAGTAACCAAAAGGTCCAGGTGCAACCTAAAGCAGAGCCTGAGTCAAAAAACAAAGATGGCAATCACACTGACATCTCTAATTTAGCTGATATCTCTGTGAACTCCCCAAACAAGTCAACGTCTATCACAACCTTTGAAATCAGTCATGATAGTGGCTGCCCCACTACTTTTTCTGATTTGGATCGTACAACAGCATCGTTT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None