Genomic Feature

zf2078

ID

ZDB-ALT-190322-8

Name

zf2078

Synonyms

whsc1 M2 (1)

Affected Genomic Region

nsd2 (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

CRISPR1-nsd2

Lab of Origin

Current Source

Other Pages

Alliance

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 13: 13004557 - 13004594 (GRCz11) (1) Details
Nucleotide change: TTTTTACCATTCTTAAAGACCTTCCCAATGCCAGTCTG/-
Variant Notes: Deletion of 38 bp within the border of exon 15 and intron 15.
Yu et al., 2017

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 38 bp deleted (1)
Transcript Consequence: None
Protein Consequence: None

Sequences

Flanking Sequence: AACTTGCTGTCTTCAGAAAAGTTGAGGTGAAAATCTAAAATGATTGTTTTTACTTAAATTTTTGAAAGATACCATTTATTAGATAAAAAAAAAGTTAGACTTAAAATCCTATTTAAAATTTAAAAAATTAAAAACGTATCAAAATATCAGAAATCTGTATTGAAATGAGTCAATTTGACTGTAAAAAAAAATAAATAAAAAATCAGCAGTCAGAATTGGCTCTAAAAATAAATAAATAAATAAATGGTGCATTACTACAAACTTCCAACCATGAGATTCTTATATGAGGATTGCAGTACCTTGATGTATTTGAATGGAGGAGGCTTCTTGTTATTTTCGTGAGCCTCTTTTGCCTCTCTCTCCATCTCGATCTCCTTAAAGCGAGTTTCAGCATCCAGCAGGGCTGCACAGTAGAAATAAATAAATAAATAAATCCCACAATCCCACAACTGCTCTAATAATGCTGATATACAAATAAGATAATAAAACAAGAATGACTA
TTTTTACCATTCTTAAAGACCTTCCCAATGCCAGTCTG/- CTGGTACTTGCTTCCCCTGTCTCCCTCCATGTAAGGAAAAACTCGACCCTGATGCGTCCAGAAATAGTCTTTAGAGCCAAAGAAGAAGACGGGGAACTCTCCAATCTCATGACGCAGGTGCTGGATGTTGGTTGGGATGTTCTTGGGATGACGGATCTCTGCAGGCCACCATCTACAGTTTCAAATCAAGTCAAAAAGGTAAACACAGGAAAATTTGCTTTTGCAGTAATTTAGTTTTCTATAAAAAAGTTTTAGGAAAATGATATACTCTTCCTACAGGAGTACTTTTATTTTGACAGCACTTGTGAGTCAGGCTACAGATAAAGTTTAGAATATGATCAGAGCAGGTGACTACAACACTCACAAGCGTTGCTTTCAATCAGAATTACACTTCCAATTTTACTATAAAAGCAGCTTTCAGTGTTTGTGATTTTTTTTATTTTTTATGTCTAAACGTGAAAGACTGAAATTTGGATATGAAATGGAGATGAAATTATAGG
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations