Genomic Feature

pu18

ID
ZDB-ALT-180726-1
Name
pu18
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Qing Deng Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 5: 22234446 - 22234462 (GRCz11) (1) Details
Nucleotide change
TCGAGTGTCAACCACAG/CACCCCTCTCTCATGT
Variant Notes
the mutation is predicted to disrupt the hairpin structure of pre-mir-223,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
16 bp inserted / 17 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GAATTGAATAACTAAAGCTTAACAGACCTCATTAGATTTAATTAAAAGAAACAAACACACAATCCCACATGCAGAGCAACACATGTTGACAAATCAAACGCATAAATTTCACAACTTCTATTTTTTTTCGGTAGCAAATGGCACTCACCCAGCAACTGCCATTGTGGTCGACATGCTAAAAACTGCTTATCTGAACTATGTCTTAGTTTACAATGTTTTTTAACACAATTATCCCTGACACAGACAGCACAATGGTAATGTACTCTTTACTGTTGTTTATTTCTATGTATCTAATCAACCATAAAGATTGCATATATGTAGAGGTAATGAATTCAAGCGCACATTATAAATGAATGTTGTCATCCTCCACATTTTGCACAAGACAAAAAGGCTGAACATGAGAGAGTAACAGGATCGCATGGGTCATACGAAGTGTTGCAGAATTCTGAAGACTCGTGCCCCCTCTCTTGGGGTATTTGACAAACTGACACCCCTTTAGA
TCGAGTGTCAACCACAG/CACCCCTCTCTCATGT TCTGTCAAATACTCTAAGAGAAGAGTCTAGATCAGGAGGAGAGAGACGGGGTGTGCTGATGGACCTGAGAGATGAAAGGAAAAAAGGATATTAAATGCAGGTTTGCAGCAGGAAGGTCATTCAATTTTACTCCTCCCTCTTCCTCCTGCTTTTTTCGTCAGATGAAATTGCAAGCAACTGAATAATCAATGGTTCTTAATTTCCTAGAAACCTCTTTCAGGCTGAATTCAAAAGCGAGACCTTGAGTGGAAAACAGCACCTGGCTCAACATGTCAGGTAATTGTGATTTAAAAGGAAGTTAAAAAAAGAATATGTTTGTATGAAAGACTTAGGCAAAGCTTGAATTCAGTATTTCTCCTCTACCATGCAACTTTTTTGCACTTCCTTTTTAATTCTAGATTCTTATTTTACCTTTTTAGCTTGGATGAGATCAGTTCATTGGGTTCCTTGGTTCTTCGATGGTTGGAGCTTCAGGAGTCCTAAAGTGTTGACTCAATGTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations