Genomic Feature

ci1009

ID
ZDB-ALT-180606-10
Name
ci1009
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Waxman Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 49747221 - 49747269 (GRCz11) (1) Details
Nucleotide change
CGAGGAAGAATGCCTCCAACCCAACCGAACCCGGGCCAGTATGCGCTAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
49 bp deleted in Exon 2 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TATTATTACAGTATAGCATTTATAATCAGACAGATGTCAGTGGCAGTGAACTAATTCTACTGAAGTCGAGATTTAAACCCGTTTTGTCCACTGTAATGTTTGCTACATGCCTATAAAACTACAAAATAACATTTCAAACGAATTTTCATGTGCGTGCGCGTGTTTGTGGAGACATAAATAGACACAAACACAGCGAGTGAGAGAGAGATAGCTAGCGTTTGTATGTCTCCATATTCTGTCCATATACAAAGGTAAACATTTACCATCCAATAATAAATGAGGTTAGTAGGGATACAAGGACCATGTGAAAAGATTTTTCTTCGAAACGCAATGCCTCACAAATAAATATTAAATATTGTGCAATTTTGTTGCAATTTCGTATATGATAAACAGCAGTCTAGACTGCTCATGCACTCGAAGTAAAGCTTCCACATCAATGATGTTTCTCAGTTCTGGATGTACATTTCCTCTCCCTTTCTTTCTTTTTGTCAGCGGTTCAG
CGAGGAAGAATGCCTCCAACCCAACCGAACCCGGGCCAGTATGCGCTAA/- CGAATGGGGATCCTCTGAACGGTCATTGCTATCTCTCCGGATACATCTCGTTACTACTTCGGGCCGAGCCTTATCCTACGTCTCGCTATGGCAGCCAGTGCATGCAGCCCAATAATATTATGGGGATCGAGAACATCTGTGAGCTTGCAGCTCGTCTGCTCTTCAGTGCAGTGGAATGGGCAAGGAACATCCCTTTCTTTCCCGATCTGCAGATCACCGACCAGGTGTCATTGCTCAGACTGACATGGAGCGAGTTATTTGTGCTAAACGCGGCTCAGTGTTCCATGCCCCTACATGTGGCCCCACTGCTCGCCGCTGCCGGCCTGCACGCCTCGCCCATGTCGGCGGATCGCGTCGTGGCCTTCATGGATCACATTCGTATCTTCCAGGAGCAGGTCGAGAAGCTCAAAGCACTGCACGTCGATTCTGCTGAATACAGCTGCATTAAGGCAATAGTGCTCTTCACGTCAGGTGAGTGTGTGAGACGAGGCCTACTCGCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations