Genomic Feature

sdu19

ID
ZDB-ALT-180129-16
Name
sdu19
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
De-Li Shi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 21: 25082984 - 25082994 (GRCz11) (1) Details
Nucleotide change
GCTGGTGAGCT/-
Variant Notes
11bp of “gCTGGTGAGCT” deletion at the junction of intron2 and exon3
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GATCTGGCTTTTACTTTTGCTTTCTAAAGTTGCCGTTATTTGTATGCGTTTTTGCATTAGAGAGAAACATTAAATGATCAATCATTTTATAAACCACTCAGATAAACTTGACTATATACTTGGAGAGTACAAAATATACTGGCTGCTAAATATTTGTATATCATTAGAATCGGCTAATAAAGCAACAAGCGAGAGAGAGAGGAGCCTTTATCTGTTAATGGGTGCACATGGCTCCTAAATTGCATAAAAGTAAGAGAAATACTGGATTCCTTTTATTTCAACAGGCTTTTAAAAATAACTTTAACCTATTAAAAAGAAAAGGTAAATAACAGTGTCATAGTAAATAAAAATATAGTAAAAATCACATTATAGTTTTGTTTGTCGCATGTAGTTGACCATTTATGTGCTTTGGGTAAAAGGTGTTTATTCAGGCTACAACCACAAGTATATTTCAAACCTGTGGGAAGCACTGCACTGAATTGTGTTTCTTCATTTGTGAA
GCTGGTGAGCT/- GCTGGATGGCATTTATTATGAGCCACGGGACGATCAGGAAAAGAAGCAGAACGTGGAGAAGGTTCTTCAGTTTGTGTCATCCAAACGGATCAGAATGCCACAGACATCTGCCAGGGGTGAGTTGTAAAGCAGGCTACTAATCACGTTTAAGCTGATAGGCCTGCTTATATATATTTTTTATCTTCCCCTTTTATCTGTCCTCAAAGACATTGTGGAAGGGAATCTCAAATCCGCAATGAGGCTCATCCTCGCTCTTGCTGCACATTTTAAACCCTCCGCATCAGCCAATCACAGAGCTGGAGCTGGTGTAAGCAGGAGTTCCACTGGCTCATCGGCCAATCACAGACCTCATTCCGCTATGGCCATGGCCCAGAATGCAGCAGCAGCACTGGCAGCAGCCAGACAGGACGCTTCTCGCCCTGGCCGTTCTGTCTTTCACCTCAGGCAAGAATGGAGGTAGGTTTAGCTTCATATTACACTTTTTAGTCCACACACTTTTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations