Genomic Feature

hg41

ID
ZDB-ALT-170809-10
Name
hg41
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sood Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 37450413 - 37450414 (GRCz11) (1) Details
Nucleotide change
TC/-
Variant Notes
by RT-PCR this mutation also leads to skipping of exon 12 resulting in protein  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted in Exon 12 (1)
Transcript Consequence
None
Protein Consequence
Amino Acid Substitution: Leu>Arg at position 408 (1)
Sequences
Flanking Sequence
GGTAAACCTGCTGTCACACACACACACACACACACACACACACACAATCCTGGGTTTTCTTCGCATGATCAGATCCGGACGTTGTTACACACAACAGGACAAAATCAAACACATCAGTCATTTGCTGGAAGACTGATCGTGTGTGTGTGTGTGTGTGTGTGTCAGCTGTGTGTGTTGTTCAGTGTGCAGTGTGTGTTGGCTCAGCTCCAGCAGGTGTTGGAGACTCATGAGGTGAACTGGCGTCTGATCCTGTGCTGTGTGTCTCATCTGCTGGTGTTCGACTCTCAGACGCAGAGCTGTCTCTCAGGTACACACACACACACACACACACACACACTCTCACGCTCCTCATGCTTTCTGTGTGTGTGTCTCTCCCTCTCATGTGTGTGTGTGTGTGTGTGTGTGTTCAGAGGTGCTGCGTGCGCTCCTCAGCTCGGCGTTCCTCCTCTTCGATGTGGAGCAGATGATCAGTGTGTTCCTGCTGGCGCGGCAGGCGGCTC
TC/- GAGGGCCCAGCGGTGTTCCAGTCCTACAGCGACTGGTTTAAGGTCGGTCACTGCACACAGAGAGTGATACTCCTGTCCCGCCCACAACCAGACCCTGTCCCCGCCCACTCCTGTTTAGAATGCCTCCGCTGCTGTAGCGCTCTCGTGTGTGTGTGTGTGTGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCCACTCTGAGTCTTTAGGTAGCAGAGTGTGAGATTTGCTCTGTTTTACAGCAGCTGCTGAGTCCACAGTTACAGTAAATAAAGGAAACACAGGACAGCGCAGCTTTACAGTACTGAGATGATGATGATGATGATGATGATGATGATGAAGGTCTAACGCTGTTGTCCTCCATCAGCTGTCGTTTGCTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations