Genomic Feature

sq1sj

ID
ZDB-ALT-170522-5
Name
sq1sj
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Jesuthasan Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 23313887 - 23313906 (GRCz11) (1) Details
Nucleotide change
CCAGAGGGGTTTGTGTGTAC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
20 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTTGAGGCAACAGTGCTAACCACTGAGCCATCATATTTATATATTTTTGTTATGAATAAAAATATAATATTGTTGATAAATAATTGATGTTAGTTCAGGTCTGTACACTCTCAGAAATAAAGGTACTGTACATGAGCTGTCACTGAGGTGGTACGTTTTCAAAAGGAACAAATTTGTACCTAAAATATTAATACCTTTATGGTACATATTAGTACCTAAACAGTACAAAAGTGTTCCTCTTTAAAATTTTAGATACTAATATATACTTTTGAGGTACCAATATGAACTCTTCACGTACAAATGTGTACCTTTTGTAAAGGTTCCGCCCCAGTGACAGCTCACGTACAGCTTTTTTTCTGAGAGTGTATACAACTGTGTTATTACATTTTGAAATAATTTCTTAAAGTATTGTTTATTTTGTATCAACTGAAATTAACAAATGGAACCTTATTTGTAAAGAATCATTAGTGAACTTACCTTCTAAGTAATACTGAAAATGC
CCAGAGGGGTTTGTGTGTAC/- CCTCGCCACTGACAACATCAATATGACAGTAAGCAGCATCATTTTAATGTGTTTCAGAAAGAGAAGAGTTCTGAAAGAAAAGAACAAATGAAAATAAAAAATGATTAAAAATATGAAAAGTCTTTTGAATCATTAACACTTTTTAGTTTTGCTTATTTGATCACAAGATTCAGTGGTATTCATCCAGTTTTTCAGACTTATGAACTCACACGTGGCCCACACACATGCACACTTCAAAGAGAATTTAAGCTATCAAAAGCATCATAAATCAGCCTCTAACCTTTACTGCTGTGCTATTCTGTTCACATGCGTAAGAATAAAATGTATATAAAAAGAACAAGTATAATAATAAAAAATATAAAATACATTTTTTCTAAATACAAATAAAACAATGTTATACAGAATTCAACAGTTCCTTCTAAGAAATTATAATTCAGCAATAAAATTATATAAGAACATTTTCAGTTATTCATCATAACCTGACAGGTCTGTTGAGTCAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations